RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	CCDC187	A0A096LP49	1063 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	SIGLEC16	A6NMB1	481 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	RASGRP1	O95267	797 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	UNG	P13051	313 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	PLA2G2A	P14555	144 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	TIMP2	P16035	220 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	HK3	P52790	923 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	GSC	P56915	257 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	TMEM52B	Q4KMG9	183 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	PERM1	Q5SV97	790 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	CFAP58	Q5T655	872 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	ERAP2	Q6P179	960 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	CRTC1	Q6UUV9	634 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	GKN2	Q86XP6	184 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	DNAAF5	Q86Y56	855 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	PHF13	Q86YI8	300 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	HID1	Q8IV36	788 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	TP53I13	Q8NBR0	393 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	C3orf20	Q8ND61	904 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	ANKRD20A12P	Q8NF67	263 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	OR6C4	Q8NGE1	309 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	PCMTD1	Q96MG8	357 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	CCDC3	Q9BQI4	270 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	WRAP53	Q9BUR4	548 aa	Known RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	LRRC61	Q9BV99	259 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	MAGEB5	Q9BZ81	275 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	TCEAL2	Q9H3H9	227 aa	Predicted RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	SYNDIG1	Q9H7V2	258 aa		14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	MBNL1	Q9NR56	388 aa	Known RBP	14.01	□□□□□ -0.17
IDH3A-222	ENST00000561279	RP1	P56715	2156 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	WASH4P	A8MWX3	477 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	CDRT15L2	A8MXV6	281 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	RASA4B	C9J798	803 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	FGF10	O15520	208 aa	Predicted RBP	14	□□□□□ -0.17
IDH3A-222	ENST00000561279	RASA4	O43374	803 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	CREB3	O43889	395 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	TNFSF15	O95150	251 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	GJB6	O95452	261 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	JAM2	P57087	298 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	PTP4A2	Q12974	167 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	EIF3I	Q13347	325 aa	Known RBP	14	□□□□□ -0.17
IDH3A-222	ENST00000561279	SERINC3	Q13530	473 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	IRF4	Q15306	451 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	UGP2	Q16851	508 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	LRRC73	Q5JTD7	316 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	ENPP7	Q6UWV6	458 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	UMODL1-AS1	Q8N2C9	162 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	ARL10	Q8N8L6	244 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	HMCES	Q96FZ2	354 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	ZNF641	Q96N77	438 aa	Predicted RBP	14	□□□□□ -0.17
IDH3A-222	ENST00000561279	EDEM3	Q9BZQ6	932 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	STRADB	Q9C0K7	418 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	CLPB	Q9H078	707 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	SUV39H2	Q9H5I1	410 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	SEPT11	Q9NVA2	429 aa	Known RBP	14	□□□□□ -0.17
IDH3A-222	ENST00000561279	UBA2	Q9UBT2	640 aa	Predicted RBP	14	□□□□□ -0.17
IDH3A-222	ENST00000561279	NEU3	Q9UQ49	428 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	SSUH2	Q9Y2M2	353 aa		14	□□□□□ -0.17
IDH3A-222	ENST00000561279	TNF	P01375	233 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	ITGA2B	P08514	1039 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	CCDC172	P0C7W6	258 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	HTR7	P34969	479 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	ZNF143	P52747	638 aa	Predicted RBP	13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	SKOR1	P84550	965 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	KRT31	Q15323	416 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	CLEC16A	Q2KHT3	1053 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	WSCD2	Q2TBF2	565 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	DNAJC24	Q6P3W2	148 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	BRAT1	Q6PJG6	821 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	PCSK4	Q6UW60	755 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	CCDC81	Q6ZN84	652 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	RD3	Q7Z3Z2	195 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	CLEC14A	Q86T13	490 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	PYROXD2	Q8N2H3	581 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	NEK11	Q8NG66	645 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	TSACC	Q96A04	125 aa	Predicted RBP	13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	VOPP1	Q96AW1	172 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	LIN37	Q96GY3	246 aa	Predicted RBP	13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	PRR11	Q96HE9	360 aa	Predicted RBP	13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	PCDHB18P	Q96TA0	734 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	APOO	Q9BUR5	198 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	NOL6	Q9H6R4	1146 aa	Known RBP	13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	FZD10	Q9ULW2	581 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279	GPR34	Q9UPC5	381 aa		13.99	□□□□□ -0.17
IDH3A-222	ENST00000561279		A0A1W2PNU3	283 aa	Predicted RBP	13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	CFAP69	A5D8W1	941 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279		J3QKU1	62 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279		K7ENP7	123 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	NTN3	O00634	580 aa	Predicted RBP	13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	ZIC2	O95409	532 aa	Predicted RBP	13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	ITIH2	P19823	946 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	KLK7	P49862	253 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	NDST2	P52849	883 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	SRP54	P61011	504 aa	Known RBP	13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	C1QBP	Q07021	282 aa	Known RBP	13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	INPP5A	Q14642	412 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	NFATC4	Q14934	902 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	AGER	Q15109	404 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	CYTH1	Q15438	398 aa		13.98	□□□□□ -0.17
IDH3A-222	ENST00000561279	ALG11	Q2TAA5	492 aa		13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms