RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 AREL1O15033 823 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 ZRANB2O95218 330 aaKnown RBP eCLIP20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 CR2P20023 1033 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 CTNNA1P35221 906 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 HNRNPDQ14103 355 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 STAT4Q14765 748 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 UGP2Q16851 508 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 HLA-BQ31612 363 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 SLC45A4Q5BKX6 768 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 TFDP3Q5H9I0 405 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 IL27RAQ6UWB1 636 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 DGLUCYQ7Z3D6 616 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 CCDC13Q8IYE1 715 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 TEX26Q8N6G2 289 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 CCDC112Q8NEF3 446 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 PDCD6IPQ8WUM4 868 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 SKA1Q96BD8 255 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 WRAP53Q9BUR4 548 aaKnown RBP20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 NOD2Q9HC29 1040 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 PCDH12Q9NPG4 1184 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 PCDHGC4Q9Y5F7 938 aa20.1■□□□□ 0.81
TSPAN3-210ENST00000561277 A0A1W2PR77 199 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 UPK3BL1B0FP48 263 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 UPK3BL2E5RIL1 263 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 KCNK1O00180 336 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 CST8O60676 142 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 CER1O95813 267 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 PAK4O96013 591 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 CCNB1P14635 433 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 HNRNPA2B1P22626 353 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 AKT2P31751 481 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 SEMG2Q02383 582 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 AP1B1Q10567 949 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 FGL2Q14314 439 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 LRRC57Q8N9N7 239 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 EXD1Q8NHP7 514 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 CXorf40AQ8TE69 158 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 SLC17A9Q9BYT1 436 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 DNAAF2Q9NVR5 837 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 RBM22Q9NW64 420 aaKnown RBP eCLIP20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 SAE1Q9UBE0 346 aaPredicted RBP20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 FNDC3AQ9Y2H6 1198 aaKnown RBP20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 ADGRG1Q9Y653 693 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 TRPM6Q9BX84 2022 aa20.09■□□□□ 0.81
TSPAN3-210ENST00000561277 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 H0Y8X5 98 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 ARHGAP6O43182 974 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 CLDN2P57739 230 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 ELP6Q0PNE2 266 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 SGCGQ13326 291 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 TFDP2Q14188 446 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 TAZQ16635 292 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 ERAP2Q6P179 960 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 B4GALNT4Q76KP1 1039 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 LRRC8AQ8IWT6 810 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 RCOR2Q8IZ40 523 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 TMEM145Q8NBT3 493 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 HCAR2Q8TDS4 363 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 HAUS1Q96CS2 278 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 ECHDC3Q96DC8 303 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 SEMA3CQ99985 751 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 POLR1EQ9GZS1 481 aaKnown RBP20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 PCDHA3Q9Y5H8 950 aa20.08■□□□□ 0.81
TSPAN3-210ENST00000561277 TP53BP1Q12888 1972 aaPredicted RBP20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 hCG_1818297A0A087WSY0 165 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 TRAFD1O14545 582 aaPredicted RBP20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 TM4SF5O14894 197 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 PPP1R12AO14974 1030 aaPredicted RBP20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 MMP20O60882 483 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 CTSKP43235 329 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 SUOXP51687 545 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 ADCY2Q08462 1091 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 PPIDQ08752 370 aaKnown RBP20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 PDK1Q15118 436 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 FAM182AQ5T1J6 154 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 MFSD2AQ8NA29 543 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 FATE1Q969F0 183 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 OLFM3Q96PB7 478 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 HEMGNQ9BXL5 484 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 HAUS2Q9NVX0 235 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 SEPT10Q9P0V9 454 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 ATP8A1Q9Y2Q0 1164 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 TMEM131Q92545 1883 aa20.08■□□□□ 0.8
TSPAN3-210ENST00000561277 CCDC66A2RUB6 948 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 TLR4O00206 839 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 RAD51BO15315 384 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 SOCS5O75159 536 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 HLA-DQB2P05538 268 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 PECAM1P16284 738 aaPredicted RBP20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 IL9RQ01113 521 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 DSC2Q02487 901 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 TRAF2Q12933 501 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 PRAMEF14Q5SWL7 426 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 PEX26Q7Z412 305 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 NT5DC3Q86UY8 548 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 ZSCAN30Q86W11 494 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 C1QTNF2Q9BXJ5 285 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 CEP41Q9BYV8 373 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 GDF3Q9NR23 364 aa20.07■□□□□ 0.8
TSPAN3-210ENST00000561277 PACSIN2Q9UNF0 486 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms