RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 TUBGCP5Q96RT8 1024 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 KLF6Q99612 283 aaPredicted RBP14.03□□□□□ -0.16
TPM1-230ENST00000561266 HEMGNQ9BXL5 484 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 CEP41Q9BYV8 373 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 C10orf88Q9H8K7 445 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 PCDH12Q9NPG4 1184 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 TMEM9BQ9NQ34 198 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 RBM22Q9NW64 420 aaKnown RBP eCLIP14.03□□□□□ -0.16
TPM1-230ENST00000561266 ANKRD6Q9Y2G4 727 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 FNDC3AQ9Y2H6 1198 aaKnown RBP14.03□□□□□ -0.16
TPM1-230ENST00000561266 COQ6Q9Y2Z9 468 aa14.03□□□□□ -0.16
TPM1-230ENST00000561266 ARID1BQ8NFD5 2236 aaPredicted RBP14.02□□□□□ -0.16
TPM1-230ENST00000561266 ARHGAP6O43182 974 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 HTRA2O43464 458 aaPredicted RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 MMP20O60882 483 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.17
TPM1-230ENST00000561266 JCHAINP01591 159 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 MMP2P08253 660 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 PDHA1P08559 390 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 PYGMP11217 842 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 CCNB1P14635 433 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 GM2AP17900 193 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 CTSKP43235 329 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 GRIA4P48058 902 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 AFF3P51826 1226 aaKnown RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 KIF5AQ12840 1032 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 ZNF211Q13398 564 aaPredicted RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 SHBQ15464 509 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 UGP2Q16851 508 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 HLA-BQ31612 363 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 UAP1L1Q3KQV9 507 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 TFDP3Q5H9I0 405 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 NAPEPLDQ6IQ20 393 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 NEK5Q6P3R8 708 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 GCNT7Q6ZNI0 430 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 PRPF39Q86UA1 669 aaKnown RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 LRRC49Q8IUZ0 686 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 CCDC13Q8IYE1 715 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 CCNYQ8ND76 341 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 EXD1Q8NHP7 514 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 FATE1Q969F0 183 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 BMFQ96LC9 184 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 ZNF641Q96N77 438 aaPredicted RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 IL12RB2Q99665 862 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 SEMA3CQ99985 751 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 WRAP53Q9BUR4 548 aaKnown RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 C1QTNF2Q9BXJ5 285 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 MAK16Q9BXY0 300 aaKnown RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 AASDHPPTQ9NRN7 309 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 CDV3Q9UKY7 258 aaKnown RBP14.02□□□□□ -0.17
TPM1-230ENST00000561266 ATP8A1Q9Y2Q0 1164 aa14.02□□□□□ -0.17
TPM1-230ENST00000561266 POM121BA6NF01 834 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 A8MX80 341 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 GOLGA6L6A8MZA4 724 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 UPK3BL1B0FP48 263 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 UPK3BL2E5RIL1 263 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 RIOK3O14730 519 aaKnown RBP14.01□□□□□ -0.17
TPM1-230ENST00000561266 GIPC1O14908 333 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 VILLO15195 856 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 CD59P13987 128 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 CD38P28907 300 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 RENBPP51606 427 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 AP1S1P61966 158 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 BCL2L1Q07817 233 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 RALGDSQ12967 914 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 TMEM52BQ4KMG9 183 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 TPRG1LQ5T0D9 272 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 ALG1LQ6GMV1 187 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 RABEPKQ7Z6M1 372 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 HCAR2Q8TDS4 363 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 FUBP1Q96AE4 644 aaKnown RBP14.01□□□□□ -0.17
TPM1-230ENST00000561266 RAB7BQ96AH8 199 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 FEM1CQ96JP0 617 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 ZNF830Q96NB3 372 aaPredicted RBP14.01□□□□□ -0.17
TPM1-230ENST00000561266 FAM118BQ9BPY3 351 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 SLC17A9Q9BYT1 436 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 KCNF1Q9H3M0 494 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 GAREM1Q9H706 876 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 ATP13A3Q9H7F0 1226 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 DNAAF2Q9NVR5 837 aaKnown RBP14.01□□□□□ -0.17
TPM1-230ENST00000561266 GUCA1BQ9UMX6 200 aa14.01□□□□□ -0.17
TPM1-230ENST00000561266 TSPAN6O43657 245 aa14□□□□□ -0.17
TPM1-230ENST00000561266 FOXD2O60548 495 aaPredicted RBP14□□□□□ -0.17
TPM1-230ENST00000561266 PRLP01236 227 aa14□□□□□ -0.17
TPM1-230ENST00000561266 SYPP08247 313 aa14□□□□□ -0.17
TPM1-230ENST00000561266 MX2P20592 715 aa14□□□□□ -0.17
TPM1-230ENST00000561266 SERPINA4P29622 427 aa14□□□□□ -0.17
TPM1-230ENST00000561266 HSPA9P38646 679 aaKnown RBP14□□□□□ -0.17
TPM1-230ENST00000561266 MMP12P39900 470 aa14□□□□□ -0.17
TPM1-230ENST00000561266 RPS21P63220 83 aaKnown RBP14□□□□□ -0.17
TPM1-230ENST00000561266 IFI35P80217 286 aaPredicted RBP14□□□□□ -0.17
TPM1-230ENST00000561266 CCDC15Q0P6D6 951 aa14□□□□□ -0.17
TPM1-230ENST00000561266 AP1B1Q10567 949 aa14□□□□□ -0.17
TPM1-230ENST00000561266 GRM3Q14832 879 aa14□□□□□ -0.17
TPM1-230ENST00000561266 PRKD1Q15139 912 aaPredicted RBP14□□□□□ -0.17
TPM1-230ENST00000561266 PPP2R5EQ16537 467 aa14□□□□□ -0.17
TPM1-230ENST00000561266 SETMARQ53H47 684 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms