RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CD27P26842 260 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 HTR1BP28222 390 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 MAT2AP31153 395 aaKnown RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 GKP32189 559 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 ACSL1P33121 698 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 ADPRHP54922 357 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 DSC2Q02487 901 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 NHLH1Q02575 133 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 SLC10A2Q12908 348 aaPredicted RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 MPP3Q13368 585 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 LAMB3Q13751 1172 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 SUZ12Q15022 739 aaKnown RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 PPP1R7Q15435 360 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 CCNG2Q16589 344 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 TAZQ16635 292 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 UGP2Q16851 508 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PPP1R21Q6ZMI0 780 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 KDELC2Q7Z4H8 507 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 HORMAD1Q86X24 394 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 TEX26Q8N6G2 289 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 DNAAF3Q8N9W5 541 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 LPCAT1Q8NF37 534 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 MAML1Q92585 1016 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 ZNF419Q96HQ0 510 aaPredicted RBP10.8□□□□□ -0.68
TPM1-229ENST00000561242 TEKT5Q96M29 485 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 OSBPL9Q96SU4 736 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 GPR63Q9BZJ6 419 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PCDH9Q9HC56 1237 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PAK5Q9P286 719 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 SARDHQ9UL12 918 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 PYCARDQ9ULZ3 195 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 ATP8A1Q9Y2Q0 1164 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
TPM1-229ENST00000561242 OBSL1O75147 1896 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 PDE2AO00408 941 aaPredicted RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 CES2O00748 559 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 BCAT2O15382 392 aaPredicted RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 LRP3O75074 770 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 HLA-DQB2P05538 268 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 PECAM1P16284 738 aaPredicted RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 PRLRP16471 622 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 PTPN3P26045 913 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 FDFT1P37268 417 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 MPLP40238 635 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 AFF3P51826 1226 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 THOP1P52888 689 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 PDE1BQ01064 536 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 CDK18Q07002 472 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 CKAP4Q07065 602 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 PTK2BQ14289 1009 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 PARP6Q2NL67 630 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 ANKRD20A2Q5SQ80 823 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 ANKRD20A1Q5TYW2 823 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 ANKRD20A3Q5VUR7 823 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 B4GALNT4Q76KP1 1039 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 LINC00523Q86TU6 105 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 DCP2Q8IU60 420 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 TP53INP2Q8IXH6 220 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 AADATQ8N5Z0 425 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 FAM71DQ8N9W8 422 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 C1orf54Q8WWF1 131 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 NELL1Q92832 810 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 ARRDC3Q96B67 414 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 CAPZA3Q96KX2 299 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 RBM15Q96T37 977 aaKnown RBP eCLIP10.79□□□□□ -0.68
TPM1-229ENST00000561242 IL12RB2Q99665 862 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 WRAP53Q9BUR4 548 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 GTPBP2Q9BX10 602 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 TLR10Q9BXR5 811 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 SLC17A9Q9BYT1 436 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 CEP41Q9BYV8 373 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 ZDHHC5Q9C0B5 715 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 PKD2L2Q9NZM6 624 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 EIF2B4Q9UI10 523 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 SNX12Q9UMY4 172 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 SLC6A14Q9UN76 642 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 CHKBQ9Y259 395 aa10.79□□□□□ -0.68
TPM1-229ENST00000561242 HELZP42694 1942 aaKnown RBP10.79□□□□□ -0.68
TPM1-229ENST00000561242 DENND4CQ5VZ89 1909 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 C2orf81A6NN90 581 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 DFNA5O60443 496 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 EPN2O95208 641 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 PGLSO95336 258 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 CD160O95971 181 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 ATP1A1P05023 1023 aaKnown RBP10.78□□□□□ -0.68
TPM1-229ENST00000561242 PYGLP06737 847 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 CTSLP07711 333 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TDGF1P13385 188 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TIMP2P16035 220 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 BCKDHBP21953 392 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 HNRNPA2B1P22626 353 aaKnown RBP10.78□□□□□ -0.68
TPM1-229ENST00000561242 KELP23276 732 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 VIPR1P32241 457 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 GRIA4P48058 902 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 RACK1P63244 317 aaKnown RBP10.78□□□□□ -0.68
TPM1-229ENST00000561242 OVGP1Q12889 678 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 TUBB2AQ13885 445 aa10.78□□□□□ -0.68
TPM1-229ENST00000561242 PRKD1Q15139 912 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms