RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 RPL26L1Q9UNX3 145 aaKnown RBP17.25■□□□□ 0.35
HDDC3-206ENST00000561036 HS3ST2Q9Y278 367 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 DOCK6Q96HP0 2047 aa17.25■□□□□ 0.35
HDDC3-206ENST00000561036 EPOPA6NHQ4 379 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 NEDD8-MDP1E9PL57 170 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 GOLGA8RI6L899 631 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 MT-CO1P00395 513 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 PRLP01236 227 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 TYRP14679 529 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 PSMA3P25788 255 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 HLA-FP30511 346 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 MAGEA12P43365 314 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 CCT5P48643 541 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 NUMBP49757 651 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 SEC24CP53992 1094 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 PDE1BQ01064 536 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 PPARDQ03181 441 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 GALNT3Q14435 633 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 LRRC14Q15048 493 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 LY6G5CQ5SRR4 150 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 NEPROQ6NW34 567 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 TAX1BP1Q86VP1 789 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 C2CD4AQ8NCU7 369 aaPredicted RBP17.24■□□□□ 0.35
HDDC3-206ENST00000561036 TCP10LQ8TDR4 215 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 STYXQ8WUJ0 223 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 OSCP1Q8WVF1 389 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 ATP2A3Q93084 1043 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 NSMCE3Q96MG7 304 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 KLF6Q99612 283 aaPredicted RBP17.24■□□□□ 0.35
HDDC3-206ENST00000561036 IQCGQ9H095 443 aaKnown RBP17.24■□□□□ 0.35
HDDC3-206ENST00000561036 VPS11Q9H270 941 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 TRPV4Q9HBA0 871 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 IL1RAPL1Q9NZN1 696 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 HACD3Q9P035 362 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 SLC17A6Q9P2U8 582 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 SLC2A6Q9UGQ3 507 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 GGA2Q9UJY4 613 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 CHKBQ9Y259 395 aa17.24■□□□□ 0.35
HDDC3-206ENST00000561036 FCF1Q9Y324 198 aaKnown RBP17.24■□□□□ 0.35
HDDC3-206ENST00000561036 NDUFAB1O14561 156 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 SOCS5O75159 536 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 IGSF6O95976 241 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 MPOP05164 745 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 DHRS4L1P0CG22 281 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 DRD4P21917 467 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 SERPINB8P50452 374 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 CBX2Q14781 532 aaPredicted RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 TAF1AQ15573 450 aaPredicted RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 INSCQ1MX18 579 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 RARS2Q5T160 578 aaKnown RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 LVRNQ6Q4G3 990 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 NPAS3Q8IXF0 933 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 NDUFAF2Q8N183 169 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 EFHBQ8N7U6 833 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 OR13J1Q8NGT2 312 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 SCG3Q8WXD2 468 aaKnown RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 SMARCD2Q92925 531 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 PTPRN2Q92932 1015 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 TIFAQ96CG3 184 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 RMDN1Q96DB5 314 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 ASB16Q96NS5 453 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 SRPK1Q96SB4 655 aaKnown RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 NSRP1Q9H0G5 558 aaKnown RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 MFSD1Q9H3U5 465 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 NSUN3Q9H649 340 aaKnown RBP17.23■□□□□ 0.35
HDDC3-206ENST00000561036 SLC25A13Q9UJS0 675 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 FBXO10Q9UK96 956 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 PLLPQ9Y342 182 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 WNT6Q9Y6F9 365 aa17.23■□□□□ 0.35
HDDC3-206ENST00000561036 ANKRD66B4E2M5 251 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 TPP1O14773 563 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 HOXC11O43248 304 aaPredicted RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 FZD6O60353 706 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 ADH1CP00326 375 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 GSRP00390 522 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 ALDOAP04075 364 aaKnown RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 GSTA1P08263 222 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 SRCP12931 536 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 HOXB8P17481 243 aaPredicted RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 GRIA4P48058 902 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 VASPP50552 380 aaPredicted RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 SNRPD1P62314 119 aaKnown RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 TRAF2Q12933 501 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 PDK4Q16654 411 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 FUT11Q495W5 492 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 FSTL4Q6MZW2 842 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 KYAT3Q6YP21 454 aaKnown RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 CPLX4Q7Z7G2 160 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 ZC3HC1Q86WB0 502 aaKnown RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 RNF135Q8IUD6 432 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 PLPP6Q8IY26 295 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 DCLK2Q8N568 766 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 GDAP1Q8TB36 358 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 BLOC1S5Q8TDH9 187 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 ZNF473Q8WTR7 871 aaKnown RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 VPS39Q96JC1 886 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 TUBGCP5Q96RT8 1024 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 GPR22Q99680 433 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 C19orf43Q9BQ61 176 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms