RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ANXA8L1Q5VT79 327 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 BICRALQ6AI39 1079 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC30A10Q6XR72 485 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ADGRA1Q86SQ6 560 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ADCY4Q8NFM4 1077 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PSMA8Q8TAA3 256 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 VPS4AQ9UN37 437 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 RGL2O15211 777 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 AVILO75366 819 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 FTH1P02794 183 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PRKAR1AP10644 381 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PSEN2P49810 448 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 LSM12Q3MHD2 195 aaKnown RBP13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 PERM1Q5SV97 790 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 HYIQ5T013 277 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 LRRC55Q6ZSA7 311 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ITCHQ96J02 903 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZYG11BQ9C0D3 744 aa13.29□□□□□ -0.28
CSPG4P11-201ENST00000560634 AP3D1O14617 1153 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 PGRMC2O15173 223 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNF37AP17032 561 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 FKBP1CQ5VVH2 108 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 LEMD2Q8NC56 503 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 BORCS5Q969J3 196 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 UROC1Q96N76 676 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 MCCC1Q96RQ3 725 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC9A7Q96T83 725 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 AKAP7Q9P0M2 348 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 KCNE2Q9Y6J6 123 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 hCG_1818297A0A087WSY0 165 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 THOP1P52888 689 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 FOLH1Q04609 750 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 KCNK18Q7Z418 384 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 RCN3Q96D15 328 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNF607Q96SK3 696 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ATP13A3Q9H7F0 1226 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 PHF11Q9UIL8 331 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 LIN7AO14910 233 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ACSL4O60488 711 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 SH3BGRLO75368 114 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 GLRA2P23416 452 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 CHKAP35790 457 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ABCG1P45844 678 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 GMFBP60983 142 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 DPYSQ14117 519 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC15A2Q16348 729 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 PYDC2Q56P42 97 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 RBM44Q6ZP01 1051 aaKnown RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 CDYL2Q8N8U2 506 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 KCTD4Q8WVF5 259 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 MTFMTQ96DP5 389 aaKnown RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ING3Q9NXR8 418 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 SPATA31A5Q5VU36 1347 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 SPATA31A7Q8IWB4 1347 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 TGDSO95455 350 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 CHRNGP07510 517 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 RPL38P63173 70 aaKnown RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZC3H12AQ5D1E8 599 aaKnown RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 HECTD3Q5T447 861 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 AHI1Q8N157 1196 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 PSMD13Q9UNM6 376 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 DMTF1Q9Y222 760 aa13.28□□□□□ -0.28
CSPG4P11-201ENST00000560634 AREL1O15033 823 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 ERN1O75460 977 aaKnown RBP13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 LRIG2O94898 1065 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 EPORP19235 508 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 CDH3P22223 829 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 SCAIQ8N9R8 606 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 PANX1Q96RD7 426 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 RTKNQ9BST9 563 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 KCNMB3Q9NPA1 279 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 TOR4AQ9NXH8 423 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 XPR1Q9UBH6 696 aa13.27□□□□□ -0.28
CSPG4P11-201ENST00000560634 TCF4P15884 667 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 MAPK9P45984 424 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 CLK3P49761 638 aaKnown RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 AIF1P55008 147 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 CXCL9Q07325 125 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 FNDC3BQ53EP0 1204 aaKnown RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 TCEAL5Q5H9L2 206 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 GPR107Q5VW38 600 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 PQLC1Q8N2U9 271 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 LNX1Q8TBB1 728 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 PDCD10Q9BUL8 212 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 N6AMT1Q9Y5N5 214 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 OR10H3O60404 316 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 RGS20O76081 388 aa13.27□□□□□ -0.29
CSPG4P11-201ENST00000560634 SLC5A9Q2M3M2 681 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms