RNA–Protein interactions for RNA: ENST00000560566.5

CLU-217, Transcript of clusterin, human

TSL 4

Gene CLU, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-217	ENST00000560566	RGL4	Q8IZJ4	473 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	SLC35B2	Q8TB61	432 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	MAIP1	Q8WWC4	291 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	TADA1	Q96BN2	335 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	IMP4	Q96G21	291 aa	Known RBP	13.61	□□□□□ -0.23
CLU-217	ENST00000560566	FEM1C	Q96JP0	617 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	PBK	Q96KB5	322 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	ARRDC1-AS1	Q9H2J1	176 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	GLOD4	Q9HC38	313 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	SUSD2	Q9UGT4	822 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	ZKSCAN5	Q9Y2L8	839 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	TTLL3	Q9Y4R7	772 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	RAI2	Q9Y5P3	530 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566	GPR179	Q6PRD1	2367 aa		13.61	□□□□□ -0.23
CLU-217	ENST00000560566		A0A1W2PPC4	97 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	SPINT1	O43278	529 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	FZD6	O60353	706 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	FOXD2	O60548	495 aa	Predicted RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	RNGTT	O60942	597 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PCDH8	O95206	1070 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PGLS	O95336	258 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	MMP2	P08253	660 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	GNS	P15586	552 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	CA4	P22748	312 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	XPA	P23025	273 aa	Predicted RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	NFKBIA	P25963	317 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	MPL	P40238	635 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	RPL26	P61254	145 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	RPS21	P63220	83 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	TRAF2	Q12933	501 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	IHH	Q14623	411 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	TMEM52B	Q4KMG9	183 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	ARMC12	Q5T9G4	340 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	ERAP2	Q6P179	960 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PRPF39	Q86UA1	669 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	HORMAD1	Q86X24	394 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	ZNF567	Q8N184	647 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	GPR161	Q8N6U8	529 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	C1orf216	Q8TAB5	229 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	CEP76	Q8TAP6	659 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PIGK	Q92643	395 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	ORAI3	Q9BRQ5	295 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	CEP41	Q9BYV8	373 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	USP29	Q9HBJ7	922 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	VPS45	Q9NRW7	570 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	TMEM74B	Q9NUR3	256 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	EIF2B4	Q9UI10	523 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PHTF1	Q9UMS5	762 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	RPL26L1	Q9UNX3	145 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	DMTF1	Q9Y222	760 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PPIL1	Q9Y3C6	166 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	PCDHB9	Q9Y5E1	797 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566	ABCA7	Q8IZY2	2146 aa		13.6	□□□□□ -0.23
CLU-217	ENST00000560566		A0A1W2PQU0	124 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CFAP69	A5D8W1	941 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	PRR5-ARHGAP8	B1AHC4	643 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CES2	O00748	559 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	NEMP1	O14524	444 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	RIOK3	O14730	519 aa	Known RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CEP104	O60308	925 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	STK10	O94804	968 aa	Known RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	FGG	P02679	453 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	ATP1A1	P05023	1023 aa	Known RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	ZNF806	P0C7X5	589 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	TGM1	P22735	817 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	MAOB	P27338	520 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	STIP1	P31948	543 aa	Known RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CXCR5	P32302	372 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CD68	P34810	354 aa	Predicted RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CD86	P42081	329 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	GNG11	P61952	73 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	PPP2CB	P62714	309 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	PPP2CA	P67775	309 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	SKOR1	P84550	965 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	CSRP2	Q16527	193 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	ZNF284	Q2VY69	593 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	TMEM259	Q4ZIN3	620 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	SETMAR	Q53H47	684 aa	Predicted RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	HS1BP3	Q53T59	392 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	PID1	Q7Z2X4	250 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	NDUFAF2	Q8N183	169 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	RASGEF1C	Q8N431	466 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	PAF1	Q8N7H5	531 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	ASB12	Q8WXK4	309 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	FCRL5	Q96RD9	977 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	FAM118B	Q9BPY3	351 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	TDRD1	Q9BXT4	1180 aa	Known RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566	PCDH12	Q9NPG4	1184 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	DNPEP	Q9ULA0	475 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	SNX12	Q9UMY4	172 aa		13.59	□□□□□ -0.23
CLU-217	ENST00000560566	ZFR2	Q9UPR6	939 aa	Known RBP	13.59	□□□□□ -0.23
CLU-217	ENST00000560566		A0A1B0GTW7	788 aa		13.58	□□□□□ -0.24
CLU-217	ENST00000560566	C5orf60	A6NFR6	353 aa		13.58	□□□□□ -0.24
CLU-217	ENST00000560566	BCAT2	O15382	392 aa	Predicted RBP	13.58	□□□□□ -0.24
CLU-217	ENST00000560566	KCNN4	O15554	427 aa		13.58	□□□□□ -0.24
CLU-217	ENST00000560566	LIAS	O43766	372 aa		13.58	□□□□□ -0.24
CLU-217	ENST00000560566	CP	P00450	1065 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms