RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 ADPRHP54922 357 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 WASHC5Q12768 1159 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 MPP3Q13368 585 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 LLGL1Q15334 1064 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 PIP5KL1Q5T9C9 394 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3GQ6DHY5 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3CQ6IPX1 549 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 PRR23BQ6ZRT6 265 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 USP45Q70EL2 814 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TBC1D3Q8IZP1 549 aaPredicted RBP12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 ARRDC2Q8TBH0 407 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 GRK7Q8WTQ7 553 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 RTP4Q96DX8 246 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 AGAP3Q96P47 875 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 GPR174Q9BXC1 333 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 SLC6A17Q9H1V8 727 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 FAM153AQ9UHL3 310 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 ZNF148Q9UQR1 794 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 PPIL1Q9Y3C6 166 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 TTLL3Q9Y4R7 772 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 R4GN57 208 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 NUMA1Q14980 2115 aa12.16□□□□□ -0.46
RABGGTA-215ENST00000560207 AP3B1O00203 1094 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 PSMD11O00231 422 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 TRAFD1O14545 582 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 TOR1BO14657 336 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 AREL1O15033 823 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 MUSKO15146 869 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 MAGEC1O60732 1142 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 PGLSO95336 258 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ACSL1P33121 698 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 RGRP47804 291 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 GRIA4P48058 902 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 EPHB1P54762 984 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 GEMP55040 296 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 NHLH1Q02575 133 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ZBTB17Q13105 803 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 OASLQ15646 514 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 PARP6Q2NL67 630 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ANKRD20A3Q5VUR7 823 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 LYSMD4Q5XG99 296 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 KIAA0895LQ68EN5 471 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 AADACL2Q6P093 401 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ARHGEF18Q6ZSZ5 1173 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 PARS2Q7L3T8 475 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 CACUL1Q86Y37 369 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 CAMK1DQ8IU85 385 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ZNF567Q8N184 647 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 CNTD1Q8N815 330 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 CCDC89Q8N998 374 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 NETO2Q8NC67 525 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 OR6K2Q8NGY2 324 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ATL2Q8NHH9 583 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 RLN3Q8WXF3 142 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ARRDC3Q96B67 414 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 IFT43Q96FT9 208 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 SCRN2Q96FV2 425 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 HERPUD2Q9BSE4 406 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 TDRD1Q9BXT4 1180 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 GBA3Q9H227 469 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 USP29Q9HBJ7 922 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 RSPH14Q9UHP6 348 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 MBD1Q9UIS9 605 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 SMG5Q9UPR3 1016 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 RAI2Q9Y5P3 530 aa12.15□□□□□ -0.46
RABGGTA-215ENST00000560207 MEI4A8MW99 385 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CCDC188H7C350 402 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 RIOK3O14730 519 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 LATO43561 262 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 FZD6O60353 706 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 PCDH8O95206 1070 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 EPN2O95208 641 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CPP00450 1065 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 TIMP2P16035 220 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 ZNF30P17039 623 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CD27P26842 260 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CXCR5P32302 372 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 FDFT1P37268 417 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 MAXP61244 160 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CDK18Q07002 472 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 OVGP1Q12889 678 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 SGCGQ13326 291 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 AGERQ15109 404 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CYP1B1Q16678 543 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 TMEM52BQ4KMG9 183 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 CYP2U1Q7Z449 544 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM124AQ86V42 546 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 HORMAD1Q86X24 394 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 SYT12Q8IV01 421 aa12.14□□□□□ -0.47
RABGGTA-215ENST00000560207 FAM160A2Q8N612 972 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms