RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RBM15Q96T37 977 aaKnown RBP eCLIP12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 C1QTNF7Q9BXJ2 289 aa12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 CDH19Q9H159 772 aa12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 WDCPQ9H6R7 721 aa12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 ATP13A1Q9HD20 1204 aa12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 ATP6V1DQ9Y5K8 247 aa12.96□□□□□ -0.33
RABGGTA-213ENST00000560127 ITPR3Q14573 2671 aa12.96□□□□□ -0.34
RABGGTA-213ENST00000560127 TRIM49BA6NDI0 452 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 TMEM110-MUSTN1A8MSY1 372 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 MTSS1O43312 755 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 THAP12O43422 761 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 MED7O43513 233 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 DAB1O75553 588 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 UGT1A3P35503 534 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 CXCR3P49682 368 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 B4GALNT1Q00973 533 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 NFATC4Q14934 902 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 OLFML1Q6UWY5 402 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 GPBAR1Q8TDU6 330 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 CXorf40AQ8TE69 158 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 ISG20Q96AZ6 181 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 KLHL32Q96NJ5 620 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 CATSPER2Q96P56 530 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 TAAR9Q96RI9 348 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 TSG101Q99816 390 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 WRAP53Q9BUR4 548 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 RDH14Q9HBH5 336 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 LRIT1Q9P2V4 623 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
RABGGTA-213ENST00000560127 ZNF891A8MT65 544 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 KRIT1O00522 736 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 NKX2-8O15522 239 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 B4GAT1O43505 415 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 GNA15P30679 374 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 GNA12Q03113 381 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 ARHGEF7Q14155 803 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 HLTFQ14527 1009 aaKnown RBP eCLIP12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 ARHGAP44Q17R89 818 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 WSCD2Q2TBF2 565 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 C14orf28Q4W4Y0 310 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 LRRC31Q6UY01 552 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 C11orf57Q6ZUT1 292 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 TTC7BQ86TV6 843 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 ATCAYQ86WG3 371 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 FMR1NBQ8N0W7 255 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 RCBTB1Q8NDN9 531 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 FAM46DQ8NEK8 389 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 PDXPQ96GD0 296 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 ABHD17AQ96GS6 310 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 C1orf74Q96LT6 269 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 NPY6RQ99463 290 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 APOOQ9BUR5 198 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 OSBPL1AQ9BXW6 950 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 AKAP7Q9P0M2 348 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 KLQ9UEF7 1012 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 COQ6Q9Y2Z9 468 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 DAAM1Q9Y4D1 1078 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 DGKBQ9Y6T7 804 aa12.94□□□□□ -0.34
RABGGTA-213ENST00000560127 SETD2Q9BYW2 2564 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 HGSO14964 777 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 P4HA2O15460 535 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 NUDT21O43809 227 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 DUX1O43812 170 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 CPNE6O95741 557 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 GSRP00390 522 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 TNFP01375 233 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 HTR1BP28222 390 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 ACVRL1P37023 503 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 CETN1Q12798 172 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 LRRC14Q15048 493 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 MYLK3Q32MK0 819 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 SLC26A9Q7LBE3 791 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 PIM3Q86V86 326 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 CACNA2D3Q8IZS8 1091 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 OR2AP1Q8NGE2 309 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 ARHGEF2Q92974 986 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 NUDT22Q9BRQ3 303 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 OR1A2Q9Y585 309 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 B3GALT1Q9Y5Z6 326 aa12.93□□□□□ -0.34
RABGGTA-213ENST00000560127 IGHV5-10-1A0A0J9YXX1 117 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 PRR19A6NJB7 356 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 B4DGG1 531 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 RAD1O60671 282 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 SRGAP2O75044 1071 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 POP4O95707 220 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 ERBB2P04626 1255 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 PRKAR1AP10644 381 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 TIMP2P16035 220 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 ANP32AP39687 249 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 UQCRFS1P47985 274 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 MLLT10P55197 1068 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 OR1D5P58170 312 aa12.92□□□□□ -0.34
RABGGTA-213ENST00000560127 SNRPD1P62314 119 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms