RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 RECQLP46063 649 aaPredicted RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 RAD51Q06609 339 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 GALNT3Q14435 633 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 ZNF234Q14588 700 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 GRM3Q14832 879 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 FNDC3BQ53EP0 1204 aaKnown RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 STEAP4Q687X5 459 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 TXNDC11Q6PKC3 985 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 ADGRE3Q9BY15 652 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 VPS37BQ9H9H4 285 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 HEBP1Q9NRV9 189 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 THAP10Q9P2Z0 257 aaPredicted RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 PIAS3Q9Y6X2 628 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 BNIP3LO60238 219 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 PGLSO95336 258 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 PIGNO95427 931 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 GSTA2P09210 222 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 SERPINA4P29622 427 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 PFKPQ01813 784 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 TDGQ13569 410 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 POU6F1Q14863 301 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 LRIG3Q6UXM1 1119 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 TMEM135Q86UB9 458 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 CHST14Q8NCH0 376 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 UHMK1Q8TAS1 419 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 CFAP36Q96G28 342 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 TRIM56Q9BRZ2 755 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 KIFC1Q9BW19 673 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 SLC2A4RGQ9NR83 387 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 SOX13Q9UN79 622 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 COL6A3P12111 3177 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 A0A087WUV0 522 aaPredicted RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 FAM237BA0A1B0GVD1 139 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 ANKRD66B4E2M5 251 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 K7EQS6 105 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 NARSO43776 548 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 SHBGP04278 402 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 SRFP11831 508 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 HNRNPLP14866 589 aaKnown RBP eCLIP12.28□□□□□ -0.44
HERC1-205ENST00000559886 GLULP15104 373 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 ADRA1DP25100 572 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 PHBP35232 272 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 RPL26P61254 145 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 ARMC12Q5T9G4 340 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 ZNF366Q8N895 744 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 OR2W6PQ8NHA6 318 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 PDCD6IPQ8WUM4 868 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 EZH1Q92800 747 aaPredicted RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 ZNF641Q96N77 438 aaPredicted RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 RANBP9Q96S59 729 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 HEPHQ9BQS7 1158 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 ZDHHC6Q9H6R6 413 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 CHRAC1Q9NRG0 131 aa12.28□□□□□ -0.44
HERC1-205ENST00000559886 RPL26L1Q9UNX3 145 aaKnown RBP12.28□□□□□ -0.44
HERC1-205ENST00000559886 EDDM13A0A1B0GTR0 161 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 POLBP06746 335 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 EIF3BP55884 814 aaKnown RBP12.27□□□□□ -0.45
HERC1-205ENST00000559886 E2F5Q15329 346 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 TMEM196Q5HYL7 178 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 EGFLAMQ63HQ2 1017 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 PKN3Q6P5Z2 889 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 SERPINA13PQ6UXR4 307 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 PPHLN1Q8NEY8 458 aaKnown RBP12.27□□□□□ -0.45
HERC1-205ENST00000559886 LPCAT1Q8NF37 534 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 GSDMBQ8TAX9 411 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 PIH1D2Q8WWB5 315 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 ECHDC3Q96DC8 303 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 SUV39H2Q9H5I1 410 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 MRM3Q9HC36 420 aaKnown RBP12.27□□□□□ -0.45
HERC1-205ENST00000559886 PRKAG3Q9UGI9 489 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 TCAF1Q9Y4C2 921 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 RPS6KL1Q9Y6S9 549 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 WASF2Q9Y6W5 498 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 TCRBV9S1A1TA0A576 114 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 ANTXRLA6NF34 631 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 AGPSO00116 658 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 NPC1O15118 1278 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 USP1O94782 785 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 IL12RB1P42701 662 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 ENPP2Q13822 863 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 CRYMQ14894 314 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 QPCTQ16769 361 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 C9orf64Q5T6V5 341 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 EMC10Q5UCC4 262 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 CYS1Q717R9 158 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 ADHFE1Q8IWW8 467 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 LRIG1Q96JA1 1093 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 RABGEF1Q9UJ41 708 aa12.27□□□□□ -0.45
HERC1-205ENST00000559886 HEATR9A2RTY3 570 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms