RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TIGD1Q96MW7 591 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 AP1M1Q9BXS5 423 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 CCDC68Q9H2F9 335 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 SH3GLB2Q9NR46 395 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 PLSCR4Q9NRQ2 329 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 GRHL1Q9NZI5 618 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 ORC3Q9UBD5 711 aaPredicted RBP3.92□□□□□ -1.78
SPG11-218ENST00000559754 RPGRIP1LQ68CZ1 1315 aa3.92□□□□□ -1.78
SPG11-218ENST00000559754 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 IGHV4-28A0A0C4DH34 117 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 A0A1W2PPH5 198 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 PGPEP1LA6NFU8 196 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 HMX3A6NHT5 357 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 SMTNL1A8MU46 457 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 E7EVH7 732 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 SLC16A5O15375 505 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 LDB3O75112 727 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 TIPRLO75663 272 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 CLDN7O95471 211 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 ACP5P13686 325 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 DAOP14920 347 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 THPOP40225 353 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 DRG2P55039 364 aaKnown RBP3.91□□□□□ -1.78
SPG11-218ENST00000559754 CASP6P55212 293 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 ACTR2P61160 394 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 C9orf57Q5W0N0 161 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 FAM205BPQ63HN1 556 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 BBS12Q6ZW61 710 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 RBFAQ8N0V3 343 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 ANKRD52Q8NB46 1076 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 TMED6Q8WW62 240 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 RILPL2Q969X0 211 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 TMEM18Q96B42 140 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 FIZ1Q96SL8 496 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 SDF4Q9BRK5 362 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 CENPOQ9BU64 300 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 C1QTNF4Q9BXJ3 329 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 AGXT2Q9BYV1 514 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 TWSG1Q9GZX9 223 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 TAF1DQ9H5J8 278 aaPredicted RBP3.91□□□□□ -1.78
SPG11-218ENST00000559754 ZNF556Q9HAH1 456 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 G6PC2Q9NQR9 355 aa3.91□□□□□ -1.78
SPG11-218ENST00000559754 TDRD9Q8NDG6 1382 aaKnown RBP3.9□□□□□ -1.78
SPG11-218ENST00000559754 PLSCR5A0PG75 271 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 OR6C68A6NDL8 312 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 DDTLA6NHG4 134 aaPredicted RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 HBP1O60381 514 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 RTN3O95197 1032 aaPredicted RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 ZBTB11O95625 1053 aaPredicted RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 PPP1R3DO95685 299 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 IGKV3-20P01619 116 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 TK1P04183 234 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 ARSAP15289 507 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 ALOX12P18054 663 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 C21orf33P30042 268 aaPredicted RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 AVPR2P30518 371 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 KRT20P35900 424 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 GJC1P36383 396 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 AARSP49588 968 aaKnown RBP eCLIP3.9□□□□□ -1.79
SPG11-218ENST00000559754 PDLIM4P50479 330 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 CCR5P51681 352 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 RBM5P52756 815 aaKnown RBP eCLIP3.9□□□□□ -1.79
SPG11-218ENST00000559754 MVDP53602 400 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 ERVFC1-1P60608 527 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 ARHGAP8P85298 464 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 ROR1Q01973 937 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 GOLGA8FQ08AF8 430 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 COASYQ13057 564 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 SLC12A1Q13621 1099 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 SLC39A14Q15043 492 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 LRRC24Q50LG9 513 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 DCAF6Q58WW2 860 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 MAP3K21Q5TCX8 1036 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 CCDC129Q6ZRS4 1044 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 SYT13Q7L8C5 426 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 ARMC9Q7Z3E5 817 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 TRIM74Q86UV6 250 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 TRIM73Q86UV7 250 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 TTC30BQ8N4P2 665 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 TDRD7Q8NHU6 1098 aaKnown RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 AFG1LQ8WV93 481 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 GOLGA1Q92805 767 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 KTI12Q96EK9 354 aaPredicted RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 SLC25A33Q9BSK2 321 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 PAIP1Q9H074 479 aaKnown RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 PLEKHA2Q9HB19 425 aa3.9□□□□□ -1.79
SPG11-218ENST00000559754 AGO1Q9UL18 857 aaKnown RBP3.9□□□□□ -1.79
SPG11-218ENST00000559754 BICDL2A1A5D9 508 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 PI4KAP2A4QPH2 592 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 ZNF432O94892 652 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 CBX6O95503 412 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 IL1AP01583 271 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 ZNF12P17014 697 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 CHMP24386 653 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 CLCN5P51795 746 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 TUBA1BP68363 451 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 CUL4BQ13620 913 aa3.89□□□□□ -1.79
SPG11-218ENST00000559754 BYSLQ13895 437 aaKnown RBP3.89□□□□□ -1.79
SPG11-218ENST00000559754 KRT32Q14532 448 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms