RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ATP13A3Q9H7F0 1226 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 PCDH12Q9NPG4 1184 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 SUSD2Q9UGT4 822 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 PPP2R2CQ9Y2T4 447 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.88■□□□□ 0.61
CASC4-209ENST00000559222 TTLL3Q9Y4R7 772 aa18.88■□□□□ 0.61
CASC4-209ENST00000559222 A0A1W2PR77 199 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 UPK3BL1B0FP48 263 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 UPK3BL2E5RIL1 263 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 H0Y8X5 98 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 RAD51BO15315 384 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 AP1G1O43747 822 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 GNSP15586 552 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 ZFXP17010 805 aaPredicted RBP18.87■□□□□ 0.61
CASC4-209ENST00000559222 TGM2P21980 687 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 SERPINA4P29622 427 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 HSPA9P38646 679 aaKnown RBP18.87■□□□□ 0.61
CASC4-209ENST00000559222 DPP6P42658 865 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 RWDD2BP57060 319 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 IFI35P80217 286 aaPredicted RBP18.87■□□□□ 0.61
CASC4-209ENST00000559222 BCL2L1Q07817 233 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 TFDP2Q14188 446 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 PRKD1Q15139 912 aaPredicted RBP18.87■□□□□ 0.61
CASC4-209ENST00000559222 STPG1Q5TH74 334 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 BBS12Q6ZW61 710 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 TXLNBQ8N3L3 684 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 CEP76Q8TAP6 659 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 ARRDC2Q8TBH0 407 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 FATE1Q969F0 183 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 HES6Q96HZ4 224 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 ZNF641Q96N77 438 aaPredicted RBP18.87■□□□□ 0.61
CASC4-209ENST00000559222 IL12RB2Q99665 862 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 WRAP53Q9BUR4 548 aaKnown RBP18.87■□□□□ 0.61
CASC4-209ENST00000559222 TSGA10Q9BZW7 698 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 IL21RQ9HBE5 538 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 SEPT10Q9P0V9 454 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 COQ6Q9Y2Z9 468 aa18.87■□□□□ 0.61
CASC4-209ENST00000559222 A0A0U1RQS6 177 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 IGLON5A6NGN9 336 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 C4orf47A7E2U8 309 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 ARHGAP33O14559 1287 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 KCNK3O14649 394 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 KRT86O43790 486 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 MMP20O60882 483 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 MMP2P08253 660 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 CLDN2P57739 230 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 ITKQ08881 620 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 RALGDSQ12967 914 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 PDK1Q15118 436 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 UGP2Q16851 508 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 KIF19Q2TAC6 998 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 ALG1LQ6GMV1 187 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 NAPEPLDQ6IQ20 393 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 ZC3H18Q86VM9 953 aaKnown RBP18.86■□□□□ 0.61
CASC4-209ENST00000559222 SYCE1Q8N0S2 351 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 RNF10Q8N5U6 811 aaKnown RBP18.86■□□□□ 0.61
CASC4-209ENST00000559222 OSBPL8Q9BZF1 889 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 AASDHPPTQ9NRN7 309 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 SNX11Q9Y5W9 270 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 CEP250Q9BV73 2442 aa18.86■□□□□ 0.61
CASC4-209ENST00000559222 TCRBV7S2A1N4TA0A589 114 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 A8MX80 341 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 PPP1R12AO14974 1030 aaPredicted RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 HTRA2O43464 458 aaPredicted RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 PDHA1P08559 390 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 PTPN7P35236 360 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 MMP12P39900 470 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 AFF3P51826 1226 aaKnown RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 RACK1P63244 317 aaKnown RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 GRM3Q14832 879 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 NEK5Q6P3R8 708 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 GCNT7Q6ZNI0 430 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 PRPF39Q86UA1 669 aaKnown RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 BBS5Q8N3I7 341 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 MINDY1Q8N5J2 469 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 PDCD6IPQ8WUM4 868 aaKnown RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 RAB7BQ96AH8 199 aa18.85■□□□□ 0.61
CASC4-209ENST00000559222 POLR1EQ9GZS1 481 aaKnown RBP18.85■□□□□ 0.61
CASC4-209ENST00000559222 SPTBN4Q9H254 2564 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 F5H423 210 aaPredicted RBP18.84■□□□□ 0.61
CASC4-209ENST00000559222 NEMP1O14524 444 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 RIOK3O14730 519 aaKnown RBP18.84■□□□□ 0.61
CASC4-209ENST00000559222 PTPN3P26045 913 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 GRIA4P48058 902 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 COPS2P61201 443 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 OTUD4Q01804 1114 aaKnown RBP18.84■□□□□ 0.61
CASC4-209ENST00000559222 CCDC15Q0P6D6 951 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 WASHC5Q12768 1159 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 NOMO1Q15155 1222 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 SETMARQ53H47 684 aaPredicted RBP18.84■□□□□ 0.61
CASC4-209ENST00000559222 PRAMEF14Q5SWL7 426 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 CFAP58Q5T655 872 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 KIAA1161Q6NSJ0 714 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 BRAT1Q6PJG6 821 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 ZNF662Q6ZS27 426 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 RABEPKQ7Z6M1 372 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 TMEM145Q8NBT3 493 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 ACTL9Q8TC94 416 aa18.84■□□□□ 0.61
CASC4-209ENST00000559222 NETO1Q8TDF5 533 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms