RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 TUFMP49411 452 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 RABGGTBP53611 331 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 SPIDRQ14159 915 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 DGUOKQ16854 277 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 MYLK3Q32MK0 819 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 VPS26BQ4G0F5 336 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ZNF484Q5JVG2 852 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 SPOUT1Q5T280 376 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 MRNIPQ6NTE8 343 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ATG14Q6ZNE5 492 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ZNF567Q8N184 647 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 FBXO39Q8N4B4 442 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 C1orf127Q8N9H9 656 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 AGBL3Q8NEM8 1001 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 OR2T34Q8NGX1 318 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 OR2T3Q8NH03 318 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 PSMA8Q8TAA3 256 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 EFHD2Q96C19 240 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 MRPL57Q9BQC6 102 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 ULBP1Q9BZM6 244 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ROGDIQ9GZN7 287 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 DPEP3Q9H4B8 488 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 RERGLQ9H628 205 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 HMG20AQ9NP66 347 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 FADS3Q9Y5Q0 445 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 A0A0J9YYE9 177 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TSPAN3O60637 253 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 H6PDO95479 791 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 SLC2A4P14672 509 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 DPEP1P16444 411 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ARL2P36404 184 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CCT8P50990 548 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 LIMK2P53671 638 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TUBA1BP68363 451 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 NR6A1Q15406 480 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 KCTD8Q6ZWB6 473 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TUBA1AQ71U36 451 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 OR52K2Q8NGK3 314 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 RORBQ92753 470 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ACOX2Q99424 681 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ZNF556Q9HAH1 456 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ABCB10Q9NRK6 738 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 MRPL39Q9NYK5 338 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 NUDT5Q9UKK9 219 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 COQ6Q9Y2Z9 468 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 A0A1B0GUL6 1792 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 A0A1W2PRG6 482 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 RAD51BO15315 384 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 FOXD2O60548 495 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 PLA2G6O60733 806 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 GUCA1CO95843 209 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 EIF2S1P05198 315 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 FGF3P11487 239 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 HGFP14210 728 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 FMO4P31512 558 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 FKBP1AP62942 108 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 TMEM26Q6ZUK4 368 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ZDHHC13Q8IUH4 622 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TMEM192Q8IY95 271 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 MAGED4Q96JG8 741 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CXorf21Q9HAI6 301 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 EIF3LQ9Y262 564 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 PRR23AA6NEV1 266 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 PDLIM1O00151 329 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 ZBTB24O43167 697 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 NRP2O60462 931 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 PDE9AO76083 593 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 SLC2A3P11169 496 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CPB1P15086 417 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CKMT2P17540 419 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 LSAMPQ13449 338 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 FBXO48Q5FWF7 155 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TRIQKQ629K1 86 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TIGD7Q6NT04 549 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 NEPROQ6NW34 567 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 EFL1Q7Z2Z2 1120 aaKnown RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 RSPH1Q8WYR4 309 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 EMID1Q96A84 441 aaPredicted RBP7.16□□□□□ -1.26
USP3-210ENST00000559192 PPP1R2P1Q96PQ5 205 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 SLC39A3Q9BRY0 314 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CCSER2Q9H7U1 834 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 LATS2Q9NRM7 1088 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TMPRSS4Q9NRS4 437 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 OR12D3Q9UGF7 316 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 TNFSF13BQ9Y275 285 aa7.16□□□□□ -1.26
USP3-210ENST00000559192 CCDC162PA2VCL2 907 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 SYNCRIPO60506 623 aaKnown RBP7.15□□□□□ -1.26
USP3-210ENST00000559192 CDC40O60508 579 aaKnown RBP eCLIP7.15□□□□□ -1.26
USP3-210ENST00000559192 CCNT2O60583 730 aaKnown RBP7.15□□□□□ -1.26
USP3-210ENST00000559192 ERCC2P18074 760 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 PAX3P23760 479 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 KRT20P35900 424 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 HK2P52789 917 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 C11orf74Q86VG3 221 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 STX12Q86Y82 276 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 EID3Q8N140 333 aa7.15□□□□□ -1.26
USP3-210ENST00000559192 GATA6Q92908 595 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms