RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 FAM129BQ96TA1 746 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 SUV39H2Q9H5I1 410 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 PIH1D1Q9NWS0 290 aaKnown RBP18.23■□□□□ 0.51
CLPX-203ENST00000558958 MUTYHQ9UIF7 546 aa18.23■□□□□ 0.51
CLPX-203ENST00000558958 ALOX15BO15296 676 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 RNF40O75150 1001 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 LEFTY1O75610 366 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 KLF8O95600 359 aaPredicted RBP18.22■□□□□ 0.51
CLPX-203ENST00000558958 FGF1P05230 155 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 UGT2B4P06133 528 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 CHRNB1P11230 501 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 CAMK2GQ13555 558 aaPredicted RBP18.22■□□□□ 0.51
CLPX-203ENST00000558958 BBS9Q3SYG4 887 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 MAP9Q49MG5 647 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 DNAJC21Q5F1R6 531 aaKnown RBP18.22■□□□□ 0.51
CLPX-203ENST00000558958 ARSIQ5FYB1 569 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 SDE2Q6IQ49 451 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 GDPD4Q6W3E5 623 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 CEP128Q6ZU80 1094 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 SIX5Q8N196 739 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 AGGF1Q8N302 714 aaeCLIP18.22■□□□□ 0.514e-7■□□□□ 8.8
CLPX-203ENST00000558958 PDCD6IPQ8WUM4 868 aaKnown RBP18.22■□□□□ 0.51
CLPX-203ENST00000558958 OR8D1Q8WZ84 308 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 SPOCK2Q92563 424 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 ECHDC3Q96DC8 303 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 OSBPL1AQ9BXW6 950 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 ADGRE3Q9BY15 652 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 MRPS17Q9Y2R5 130 aaKnown RBP18.22■□□□□ 0.51
CLPX-203ENST00000558958 PCDHB9Q9Y5E1 797 aa18.22■□□□□ 0.51
CLPX-203ENST00000558958 SDR42E2A6NKP2 422 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 ADAM23O75077 832 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 ERLIN1O75477 346 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 BANF1O75531 89 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 PRNPP04156 253 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 H2AFXP16104 143 aaPredicted RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 TPH1P17752 444 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 NPY2RP49146 381 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 SESN2P58004 480 aaPredicted RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 DHX9Q08211 1270 aaKnown RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 PDIA2Q13087 525 aaKnown RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 GALNT3Q14435 633 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 HSF5Q4G112 596 aaPredicted RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 RELL1Q8IUW5 271 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 TXNDC5Q8NBS9 432 aaKnown RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 TMIEQ8NEW7 156 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 HNRNPLLQ8WVV9 542 aaKnown RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 CAVIN3Q969G5 261 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 SIGLEC10Q96LC7 697 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 TXLNGYQ9BZA5 131 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 SAYSD1Q9NPB0 183 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 LTB4R2Q9NPC1 389 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 PPM1HQ9ULR3 514 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 RPL26L1Q9UNX3 145 aaKnown RBP18.21■□□□□ 0.51
CLPX-203ENST00000558958 ANKRD36A6QL64 1941 aa18.21■□□□□ 0.51
CLPX-203ENST00000558958 KANSL1LA0AUZ9 987 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 ANKRD66B4E2M5 251 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 SYNCRIPO60506 623 aaKnown RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 ALADP13716 330 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 MGAT1P26572 445 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 TARSP26639 723 aaKnown RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 MSLNQ13421 630 aaPredicted RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 SLMAPQ14BN4 828 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 FASTKD3Q14CZ7 662 aaKnown RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 CERCAMQ5T4B2 595 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 TMC3Q7Z5M5 1100 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 DSG4Q86SJ6 1040 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 ZSWIM9Q86XI8 627 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 SYNPOQ8N3V7 929 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 LPCAT1Q8NF37 534 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 RPLP0P6Q8NHW5 317 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 PIH1D2Q8WWB5 315 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 RMDN1Q96DB5 314 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 LRRC39Q96DD0 335 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 KLHL32Q96NJ5 620 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 NECAB3Q96P71 396 aaPredicted RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 NELL2Q99435 816 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 WDR83Q9BRX9 315 aaKnown RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 BFARQ9NZS9 450 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 SARDHQ9UL12 918 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 MTF2Q9Y483 593 aaPredicted RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 TEX264Q9Y6I9 313 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 ATG2BQ96BY7 2078 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 A0A1W2PQ67 120 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 MAGEA4P43358 317 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 GRIA4P48058 902 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 FZD5Q13467 585 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 LRRC32Q14392 662 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 STARD3Q14849 445 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 QPCTQ16769 361 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 ZNF805Q5CZA5 627 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 HP1BP3Q5SSJ5 553 aaPredicted RBP18.2■□□□□ 0.5
CLPX-203ENST00000558958 KIAA1211LQ6NV74 962 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 BRAT1Q6PJG6 821 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 ZBED8Q8IZ13 594 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 MPP5Q8N3R9 675 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 PIP4K2CQ8TBX8 421 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 HCAR2Q8TDS4 363 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 IL22Q9GZX6 179 aa18.2■□□□□ 0.5
CLPX-203ENST00000558958 ARGLU1Q9NWB6 273 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms