RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 HNRNPKP61978 463 aaKnown RBP eCLIP21.68■■□□□ 1.06
CRNDE-205ENST00000558952 TMEM52BQ4KMG9 183 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 DHRS13Q6UX07 377 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 CCNI2Q6ZMN8 369 aaPredicted RBP21.68■■□□□ 1.06
CRNDE-205ENST00000558952 ATPAF2Q8N5M1 289 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 KDF1Q8NAX2 398 aaPredicted RBP21.68■■□□□ 1.06
CRNDE-205ENST00000558952 ZCCHC14Q8WYQ9 949 aaKnown RBP21.68■■□□□ 1.06
CRNDE-205ENST00000558952 PSKH2Q96QS6 385 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 PCDH12Q9NPG4 1184 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 GPR27Q9NS67 375 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 ABHD10Q9NUJ1 306 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 ETNK2Q9NVF9 386 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 DOCK9Q9BZ29 2069 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 KNL1Q8NG31 2342 aa21.68■■□□□ 1.06
CRNDE-205ENST00000558952 TRPM6Q9BX84 2022 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 NEMP2A6NFY4 417 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 BUB1BO60566 1050 aaPredicted RBP21.67■■□□□ 1.06
CRNDE-205ENST00000558952 PIAS2O75928 621 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 PROSCO94903 275 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 HSPA9P38646 679 aaKnown RBP21.67■■□□□ 1.06
CRNDE-205ENST00000558952 SCNN1BP51168 640 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 AP1S1P61966 158 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 PTK2BQ14289 1009 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 FZD2Q14332 565 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 ZNF542PQ5EBM4 170 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 TP53INP2Q8IXH6 220 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 SLC25A45Q8N413 288 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 CENPTQ96BT3 561 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 PACSIN1Q9BY11 444 aa21.67■■□□□ 1.06
CRNDE-205ENST00000558952 TPRP12270 2363 aaKnown RBP21.66■■□□□ 1.06
CRNDE-205ENST00000558952 RIOK3O14730 519 aaKnown RBP21.66■■□□□ 1.06
CRNDE-205ENST00000558952 FFAR2O15552 330 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 MFAP3LO75121 409 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 CKMT2P17540 419 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 ACADVLP49748 655 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 PFN3P60673 137 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 POLR2LP62875 67 aaKnown RBP21.66■■□□□ 1.06
CRNDE-205ENST00000558952 SLC10A7Q0GE19 358 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 ZNF211Q13398 564 aaPredicted RBP21.66■■□□□ 1.06
CRNDE-205ENST00000558952 SMAD1Q15797 465 aaKnown RBP21.66■■□□□ 1.06
CRNDE-205ENST00000558952 ZFYVE27Q5T4F4 411 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 KCTD6Q8NC69 237 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 OR4C6Q8NH72 309 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 TSC1Q92574 1164 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 CCDC42Q96M95 316 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 UCKL1Q9NWZ5 548 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 ZMIZ1Q9ULJ6 1067 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 ATP8A1Q9Y2Q0 1164 aa21.66■■□□□ 1.06
CRNDE-205ENST00000558952 CABIN1Q9Y6J0 2220 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.65■■□□□ 1.06
CRNDE-205ENST00000558952 TOR1BO14657 336 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 SIGLEC6O43699 453 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 LZTS3O60299 673 aaPredicted RBP21.65■■□□□ 1.06
CRNDE-205ENST00000558952 CSF2P04141 144 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 TMEM253P0C7T8 217 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 IGFALSP35858 605 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 ADKP55263 362 aaKnown RBP21.65■■□□□ 1.06
CRNDE-205ENST00000558952 YPEL5P62699 121 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 DAB2P98082 770 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 ILKQ13418 452 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 ASTE1Q2TB18 679 aaPredicted RBP21.65■■□□□ 1.06
CRNDE-205ENST00000558952 CNGA4Q8IV77 575 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 MAP7D3Q8IWC1 876 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 CHD8Q9HCK8 2581 aa21.65■■□□□ 1.06
CRNDE-205ENST00000558952 TRIM38O00635 465 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 MUSKO15146 869 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 MAFKO60675 156 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 KRT7P08729 469 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 C6P13671 934 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 NME1P15531 152 aaKnown RBP21.64■■□□□ 1.05
CRNDE-205ENST00000558952 HNF1BP35680 557 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 MMP12P39900 470 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 MMRN1Q13201 1228 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 LRRC14Q15048 493 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 PDK2Q15119 407 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 PROX2Q3B8N5 592 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 TMPRSS12Q86WS5 348 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 ZSWIM9Q86XI8 627 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 LRRC49Q8IUZ0 686 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 TP53I13Q8NBR0 393 aaPredicted RBP21.64■■□□□ 1.05
CRNDE-205ENST00000558952 BTN2A2Q8WVV5 523 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 DUSP23Q9BVJ7 150 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 NHEJ1Q9H9Q4 299 aaPredicted RBP21.64■■□□□ 1.05
CRNDE-205ENST00000558952 SCUBE2Q9NQ36 999 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 EVA1BQ9NVM1 165 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 NLGN3Q9NZ94 848 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 COQ6Q9Y2Z9 468 aa21.64■■□□□ 1.05
CRNDE-205ENST00000558952 A0A1W2PQ67 120 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 TMEM110-MUSTN1A8MSY1 372 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 PRKCGP05129 697 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 CD48P09326 243 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 JUNDP17535 347 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 MAN1A1P33908 653 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 LIG3P49916 1009 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 DPYSL3Q14195 570 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 IRF4Q15306 451 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 MARC1Q5VT66 337 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 FAM71BQ8TC56 605 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 ECHDC3Q96DC8 303 aa21.63■■□□□ 1.05
CRNDE-205ENST00000558952 NUDCD1Q96RS6 583 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms