RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SH3BP5O60239 455 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 MMP20O60882 483 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 IGSF6O95976 241 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 KRT7P08729 469 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SLC1A1P43005 524 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 RECQLP46063 649 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SCNN1BP51168 640 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 AFF3P51826 1226 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ATXN3P54252 364 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 NXPH1P58417 271 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 IL9RQ01113 521 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 DSC2Q02487 901 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 BNIP3Q12983 259 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 UGP2Q16851 508 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 TMEM52BQ4KMG9 183 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 N4BP2L1Q5TBK1 243 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 TMCO4Q5TGY1 634 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 NAPEPLDQ6IQ20 393 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 C11orf63Q6NUN7 778 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SPOCD1Q6ZMY3 1216 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 NT5DC3Q86UY8 548 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 TP53I13Q8NBR0 393 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 DEFB124Q8NES8 71 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ZNF599Q96NL3 588 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SLC17A9Q9BYT1 436 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ZDHHC5Q9C0B5 715 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 BRD8Q9H0E9 1235 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 C10orf88Q9H8K7 445 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 SP110Q9HB58 689 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 PCDH12Q9NPG4 1184 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 PACSIN2Q9UNF0 486 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ATP8A1Q9Y2Q0 1164 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 CAPN6Q9Y6Q1 641 aa12.76□□□□□ -0.37
RABGGTA-207ENST00000558936 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 KCNK1O00180 336 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 TLR4O00206 839 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 MATN3O15232 486 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 DDX3YO15523 660 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 PCDH8O95206 1070 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 KRT1P04264 644 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 CSRP1P21291 193 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 LHCGRP22888 699 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 CD38P28907 300 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 CD68P34810 354 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 CYLC1P35663 651 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 IGFALSP35858 605 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 PPIDQ08752 370 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 RFTN1Q14699 578 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 NEK5Q6P3R8 708 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 FBXL19Q6PCT2 694 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 TTC7BQ86TV6 843 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 VSIG1Q86XK7 387 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 RHOT1Q8IXI2 618 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 KATNAL2Q8IYT4 538 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 PIH1D2Q8WWB5 315 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 FATE1Q969F0 183 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 TADA1Q96BN2 335 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 HDAC11Q96DB2 347 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 NUDCD1Q96RS6 583 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 IL12RB2Q99665 862 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 GORASP1Q9BQQ3 440 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 WRAP53Q9BUR4 548 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 OSBPL1AQ9BXW6 950 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 NT5MQ9NPB1 228 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 BPTFQ12830 3046 aa12.75□□□□□ -0.37
RABGGTA-207ENST00000558936 A0A1B0GTQ1 180 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 A8MX80 341 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 OPHN1O60890 802 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 PYGMP11217 842 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 CCNCP24863 283 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 CTNNA1P35221 906 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 MMP12P39900 470 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 MMP13P45452 471 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 HNRNPDQ14103 355 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 CDKN3Q16667 212 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 PSAPL1Q6NUJ1 521 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 TSPAN33Q86UF1 283 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 GATAD2AQ86YP4 633 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 SLC25A45Q8N413 288 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 ATPAF2Q8N5M1 289 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 MFSD2AQ8NA29 543 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 PLA2G15Q8NCC3 412 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 SAP25Q8TEE9 199 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 EID2BQ96D98 161 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 ZNF641Q96N77 438 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 TCEAL2Q9H3H9 227 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 TM7SF3Q9NS93 570 aa12.74□□□□□ -0.37
RABGGTA-207ENST00000558936 DONSONQ9NYP3 566 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms