RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 ACOT2P49753 483 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 CLDN2P57739 230 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 HDAC1Q13547 482 aaPredicted RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 AUHQ13825 339 aaKnown RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 FZD2Q14332 565 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 C16orf72Q14CZ0 275 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 CALCRLQ16602 461 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 MDH1BQ5I0G3 518 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 C9orf64Q5T6V5 341 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 CRELD2Q6UXH1 353 aaPredicted RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 C4orf50Q6ZRC1 276 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 KIAA0907Q7Z7F0 614 aaPredicted RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 CHD1LQ86WJ1 897 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 SMC5Q8IY18 1101 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 UNC5BQ8IZJ1 945 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 NUP93Q8N1F7 819 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 SDR16C5Q8N3Y7 309 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 OVCA2Q8WZ82 227 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 GOLGA1Q92805 767 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 KLK6Q92876 244 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 PTPRN2Q92932 1015 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 SRRTQ9BXP5 876 aaKnown RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 IKZF4Q9H2S9 585 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 TCEAL2Q9H3H9 227 aaPredicted RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 GPR27Q9NS67 375 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 GDAP2Q9NXN4 497 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 RRN3Q9NYV6 651 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 SIX4Q9UIU6 781 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 TLK1Q9UKI8 766 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 C2CD2Q9Y426 696 aa6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 NYNRINQ9P2P1 1898 aaKnown RBP6.53□□□□□ -1.36
AC090888.3-201ENST00000558917 TBC1D3DA0A087WVF3 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3IA0A087WXS9 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3EA0A087X179 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3KA0A087X1G2 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 LOC101059948A0A1B0GTJ6 334 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CCDC196A0A1B0GTZ2 297 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3FA6NER0 549 aaPredicted RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3LB9A6J9 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 PRSS44E7EML9 344 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 STMND1H3BQB6 276 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TIMM44O43615 452 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 JAK2O60674 1132 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 MAGEC1O60732 1142 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 HUS1O60921 280 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 GSTM1P09488 218 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3HP0C7X1 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CD99P14209 185 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 GOT1P17174 413 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 RPA1P27694 616 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CD82P27701 267 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 HOXD9P28356 352 aaPredicted RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 MATR3P43243 847 aaKnown RBP eCLIP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 PSMD8P48556 350 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CCT2P78371 535 aaKnown RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 AKAP17AQ02040 695 aaKnown RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CLCQ05315 142 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 STAT4Q14765 748 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 ZRSR2Q15696 482 aaKnown RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 ARHGAP44Q17R89 818 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 ZFYVE27Q5T4F4 411 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 HLA-DQA1Q5Y7H0 255 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3GQ6DHY5 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 OR6B2Q6IFH4 312 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3CQ6IPX1 549 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 GCNT7Q6ZNI0 430 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 PAQR9Q6ZVX9 377 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 C1orf186Q6ZWK4 172 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CHST9Q7L1S5 443 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 PRPF39Q86UA1 669 aaKnown RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TMEM135Q86UB9 458 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 SLITRK4Q8IW52 837 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TBC1D3Q8IZP1 549 aaPredicted RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TMEM86AQ8N2M4 240 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 GLIS1Q8NBF1 620 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 MYCBPAPQ8TBZ2 947 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 GTF3C6Q969F1 213 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 LMLNQ96KR4 655 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 MRGPRX3Q96LB0 322 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 OMDQ99983 421 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 SPATA25Q9BR10 227 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CALN1Q9BXU9 219 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 B3GNT5Q9BYG0 378 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CDH19Q9H159 772 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 DPEP3Q9H4B8 488 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 NMUR1Q9HB89 426 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 DNAJC28Q9NX36 388 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 CDH9Q9ULB4 789 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 SCML1Q9UN30 329 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 AGAP1Q9UPQ3 857 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 SNX9Q9Y5X1 595 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 MRPS18BQ9Y676 258 aaKnown RBP6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 TLN2Q9Y4G6 2542 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 MYO7BQ6PIF6 2116 aa6.52□□□□□ -1.37
AC090888.3-201ENST00000558917 NEMP2A6NFY4 417 aa6.51□□□□□ -1.37
AC090888.3-201ENST00000558917 ANKRD63C9JTQ0 380 aa6.51□□□□□ -1.37
AC090888.3-201ENST00000558917 PRAMEF26H0Y7S4 382 aa6.51□□□□□ -1.37
AC090888.3-201ENST00000558917 SLC31A1O15431 190 aa6.51□□□□□ -1.37
AC090888.3-201ENST00000558917 ZG16O60844 167 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms