RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 CCDC15Q0P6D6 951 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 TAZQ16635 292 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 RABEPKQ7Z6M1 372 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 NT5DC3Q86UY8 548 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CCDC13Q8IYE1 715 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 MINDY1Q8N5J2 469 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 TEX26Q8N6G2 289 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 MAML1Q92585 1016 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 ALG3Q92685 438 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 FEM1CQ96JP0 617 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 TSGA13Q96PP4 275 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 SMIM14Q96QK8 99 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 WRAP53Q9BUR4 548 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CEP41Q9BYV8 373 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 ANKRD6Q9Y2G4 727 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 PCDHA3Q9Y5H8 950 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CAPN6Q9Y6Q1 641 aa13.96□□□□□ -0.17
TSPAN3-205ENST00000558745 CACNA1EQ15878 2313 aa13.96□□□□□ -0.18
TSPAN3-205ENST00000558745 ASCC3Q8N3C0 2202 aaKnown RBP13.96□□□□□ -0.18
TSPAN3-205ENST00000558745 TRPM6Q9BX84 2022 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 TRAFD1O14545 582 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 TM4SF5O14894 197 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 AREL1O15033 823 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ARHGAP6O43182 974 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 FOXD2O60548 495 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 HLA-DQB2P05538 268 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 SYPP08247 313 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 CCNB1P14635 433 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 XPAP23025 273 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 CTNNA1P35221 906 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 DSC2Q02487 901 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 NIPAL4Q0D2K0 466 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 AP1B1Q10567 949 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 TRAF2Q12933 501 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ZBTB17Q13105 803 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ZNF211Q13398 564 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 HNRNPDQ14103 355 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 UGP2Q16851 508 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 HLA-BQ31612 363 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 TMEM259Q4ZIN3 620 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 NEK5Q6P3R8 708 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ADAT2Q7Z6V5 191 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 EXD1Q8NHP7 514 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 PDCD6IPQ8WUM4 868 aaKnown RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ZNF830Q96NB3 372 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 NUDCD1Q96RS6 583 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 SEMA3CQ99985 751 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 MGME1Q9BQP7 344 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 SLC17A9Q9BYT1 436 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 GAREM1Q9H706 876 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 ATP13A3Q9H7F0 1226 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 PCDH12Q9NPG4 1184 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 DKK3Q9UBP4 350 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 COQ6Q9Y2Z9 468 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 TTLL3Q9Y4R7 772 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 SPTBN2O15020 2390 aa13.95□□□□□ -0.18
TSPAN3-205ENST00000558745 LAMA1P25391 3075 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 A0A0U1RQS6 177 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 TSPAN11A1L157 253 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 ZNF487B1APH4 448 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 AP1G1O43747 822 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 PYGMP11217 842 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 MX2P20592 715 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 CTNNA2P26232 953 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 CD38P28907 300 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 SERPINA4P29622 427 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 GRIA4P48058 902 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 LIMK1P53667 647 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 FAM193AP78312 1265 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 IL9RQ01113 521 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 PPIDQ08752 370 aaKnown RBP13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 STAT4Q14765 748 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 TEAD4Q15561 434 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 TFDP3Q5H9I0 405 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 NAPEPLDQ6IQ20 393 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 PEX26Q7Z412 305 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 VSIG1Q86XK7 387 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 LRRC49Q8IUZ0 686 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 BBS5Q8N3I7 341 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 PAF1Q8N7H5 531 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 CNTD1Q8N815 330 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 RAB7BQ96AH8 199 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 HDAC11Q96DB2 347 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 OLFM3Q96PB7 478 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 TUBGCP5Q96RT8 1024 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 SEPT10Q9P0V9 454 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 AMFRQ9UKV5 643 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 FNDC3AQ9Y2H6 1198 aaKnown RBP13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 ANKRD36A6QL64 1941 aa13.94□□□□□ -0.18
TSPAN3-205ENST00000558745 UPK3BL1B0FP48 263 aa13.93□□□□□ -0.18
TSPAN3-205ENST00000558745 UPK3BL2E5RIL1 263 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms