RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TNFSF9P41273 254 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 FBXO42Q6P3S6 717 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 ETNPPLQ8TBG4 499 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 EQTNQ9NQ60 294 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 BARX2Q9UMQ3 279 aaPredicted RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 MTF2Q9Y483 593 aaPredicted RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 MUTP22033 750 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 MYBPC1Q00872 1141 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 FBXO48Q5FWF7 155 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 WDR12Q9GZL7 423 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 MARCH7Q9H992 704 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 SLCO1B3Q9NPD5 702 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 DPPA5A6NC42 116 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 CCL16O15467 120 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 TCF4P15884 667 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 NCK1P16333 377 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 FAM220AQ7Z4H9 259 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 ZCCHC9Q8N567 271 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 FAM47BQ8NA70 645 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 GLIS3Q8NEA6 775 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 KBTBD7Q8WVZ9 684 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 HMX1Q9NP08 348 aaPredicted RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 AHSPQ9NZD4 102 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 A0A087X1B8 175 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 IQCF5A8MTL0 148 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 F8VP50 259 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 SMIM22K7EJ46 135 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 VPS4BO75351 444 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 LYPLA1O75608 230 aaPredicted RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 S100A1P23297 94 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 RPS12P25398 132 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 GRIA4P48058 902 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 DPYSL3Q14195 570 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 TTC23Q5W5X9 447 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 KYAT3Q6YP21 454 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 DAW1Q8N136 415 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 OR8H3Q8N146 312 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 SLC47A1Q96FL8 570 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 NOL11Q9H8H0 719 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 G3V2T6 193 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 TRIM38O00635 465 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 SERPINA1P01009 418 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 CHKAP35790 457 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 NDUFV1P49821 464 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 RRP1BQ14684 758 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 FAM187BQ17R55 369 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 MAB21L3Q8N8X9 362 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 REPS2Q8NFH8 660 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 PIWIL2Q8TC59 973 aaKnown RBP14.04□□□□□ -0.16
SPG11-210ENST00000558319 RAD51AP1Q96B01 352 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 CLPTM1LQ96KA5 538 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 FUCA2Q9BTY2 467 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 TAS2R14Q9NYV8 317 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 CD84Q9UIB8 345 aa14.04□□□□□ -0.16
SPG11-210ENST00000558319 FARP2O94887 1054 aaPredicted RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 RPL4P36578 427 aaKnown RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 SPDYCQ5MJ68 293 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 CRELD2Q6UXH1 353 aaPredicted RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 SAMD3Q8N6K7 520 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 SCAIQ8N9R8 606 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 POF1BQ8WVV4 589 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 CATSPERZQ9NTU4 200 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 UCKL1Q9NWZ5 548 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 PSMD9O00233 223 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 MAP2K7O14733 419 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 SNAP91O60641 907 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 RECQL5O94762 991 aaPredicted RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 PRKAA2P54646 552 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 NAGLUP54802 743 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 PNPT1Q8TCS8 783 aaKnown RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 ZNF606Q8WXB4 792 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 PGM2Q96G03 612 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 OSBPL11Q9BXB4 747 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ALOX5P09917 674 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 LINC00032P0C843 101 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 MYBL2P10244 700 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 MMP13P45452 471 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 PPP2R2BQ00005 443 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 NRG1Q02297 640 aaPredicted RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 GRSF1Q12849 480 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPG11-210ENST00000558319 ITGA7Q13683 1181 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 CDKAL1Q5VV42 579 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 GTF3C2Q8WUA4 911 aaPredicted RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 KAT5Q92993 513 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 TDRD1Q9BXT4 1180 aaKnown RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 ZNF304Q9HCX3 659 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 DDX4Q9NQI0 724 aaKnown RBP14.03□□□□□ -0.16
SPG11-210ENST00000558319 OPTCQ9UBM4 332 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ENTPD4Q9Y227 616 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 RGSL1A5PLK6 1076 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 STX16-NPEPL1H3BU86 382 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 EML1O00423 815 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 STX16O14662 325 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 CASKO14936 926 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 ZBTB14O43829 449 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 SCN2BO60939 215 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 SREBF1P36956 1147 aa14.03□□□□□ -0.16
SPG11-210ENST00000558319 SQLEQ14534 574 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms