RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 TMEM110-MUSTN1A8MSY1 372 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 PPP1R12AO14974 1030 aaPredicted RBP8.76□□□□□ -1.01
USP3-208ENST00000558285 SOCS5O75159 536 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 TM7SF2O76062 418 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 MTA2O94776 668 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 ADRB1P08588 477 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 CYP2A6P11509 494 aaPredicted RBP8.76□□□□□ -1.01
USP3-208ENST00000558285 HTR1BP28222 390 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 MAT2AP31153 395 aaKnown RBP8.76□□□□□ -1.01
USP3-208ENST00000558285 CTSKP43235 329 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 THOP1P52888 689 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 TCEAL1Q15170 157 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 KIF19Q2TAC6 998 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 TMEM259Q4ZIN3 620 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 EGFL6Q8IUX8 553 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 ABCA7Q8IZY2 2146 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 SLC35G2Q8TBE7 412 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 RHBDD1Q8TEB9 315 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 LRRC45Q96CN5 670 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 SLC6A18Q96N87 628 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 KLHL32Q96NJ5 620 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 PSKH2Q96QS6 385 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 SLC17A9Q9BYT1 436 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 SLC39A8Q9C0K1 460 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 SUV39H2Q9H5I1 410 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 PCDH18Q9HCL0 1135 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 ANGPTL2Q9UKU9 493 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 SARDHQ9UL12 918 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 NEU3Q9UQ49 428 aa8.76□□□□□ -1.01
USP3-208ENST00000558285 A0A0A6YYK5 440 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 LRRD1A4D1F6 860 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 EFCAB8A8MWE9 144 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 PDE2AO00408 941 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 TM4SF5O14894 197 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 SLC31A1O15431 190 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 MTSS1O43312 755 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 PSTPIP1O43586 416 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 CTSLP07711 333 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 KELP23276 732 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 MMP13P45452 471 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 BLKP51451 505 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 CORO7P57737 925 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 YPEL5P62699 121 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 SIM1P81133 766 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 SLC25A11Q02978 314 aaKnown RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 ITKQ08881 620 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 TBX2Q13207 712 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 NAA30Q147X3 362 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 PDK1Q15118 436 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 TRIP6Q15654 476 aaKnown RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 CA9Q16790 459 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 ASTE1Q2TB18 679 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 RAB6CQ53S08 254 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 AFMIDQ63HM1 303 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 KIAA1328Q86T90 577 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 DEFB124Q8NES8 71 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 BTN2A2Q8WVV5 523 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 UBXN4Q92575 508 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 FATE1Q969F0 183 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 ARRDC3Q96B67 414 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 LENG8Q96PV6 779 aaPredicted RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 PEBP4Q96S96 227 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 TRIM7Q9C029 511 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 POLR1EQ9GZS1 481 aaKnown RBP8.75□□□□□ -1.01
USP3-208ENST00000558285 RAB6CQ9H0N0 254 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 PRM3Q9NNZ6 103 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 FTSJ1Q9UET6 329 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 FADS3Q9Y5Q0 445 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 SNX11Q9Y5W9 270 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 SDK1Q7Z5N4 2213 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 NUP205Q92621 2012 aa8.75□□□□□ -1.01
USP3-208ENST00000558285 A0A1B0GTQ1 180 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 APOL1O14791 398 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 LZTS3O60299 673 aaPredicted RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 KRT1P04264 644 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 PYGLP06737 847 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 THEGLP0DJG4 465 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 AMPD1P23109 780 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 CCNCP24863 283 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 ABL2P42684 1182 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 NR2C2P49116 596 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 SCNN1BP51168 640 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 HADHBP55084 474 aaKnown RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 NXPH1P58417 271 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 HNRNPKP61978 463 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP3-208ENST00000558285 PEX6Q13608 980 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 PAFAH1B3Q15102 231 aaKnown RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 ANKRD20A8PQ5CZ79 823 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 ATXN7L2Q5T6C5 722 aaPredicted RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 CCDC70Q6NSX1 233 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 KYAT3Q6YP21 454 aaKnown RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 USP45Q70EL2 814 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 PARS2Q7L3T8 475 aaKnown RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 PTAR1Q7Z6K3 402 aaPredicted RBP8.74□□□□□ -1.01
USP3-208ENST00000558285 SYCE1Q8N0S2 351 aa8.74□□□□□ -1.01
USP3-208ENST00000558285 ARFGAP1Q8N6T3 406 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms