RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 SYT13Q7L8C5 426 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 STK40Q8N2I9 435 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 BBS5Q8N3I7 341 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 KDM1BQ8NB78 822 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 OR6K2Q8NGY2 324 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 MAIP1Q8WWC4 291 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 PTPRN2Q92932 1015 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 TSGA13Q96PP4 275 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 HHIPQ96QV1 700 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 CITED4Q96RK1 184 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 GABRG3Q99928 467 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 SLC6A17Q9H1V8 727 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 NT5MQ9NPB1 228 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 PRSS16Q9NQE7 514 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 RBM22Q9NW64 420 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 SLC6A14Q9UN76 642 aa12.19□□□□□ -0.46
HMGB1P8-201ENST00000558211 CACNA1IQ9P0X4 2223 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZDBF2Q9HCK1 2354 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 A0A1W2PQF6 199 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 TCRBV21S2A2A0A5A6 115 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 TARSL2A2RTX5 802 aaKnown RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 A6NHS1 94 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 HACD1B0YJ81 288 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 PGRMC1O00264 195 aaKnown RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF821O75541 412 aaPredicted RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 PEX11BO96011 259 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 ALAS2P22557 587 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 GKP32189 559 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 SOX18P35713 384 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 MMP13P45452 471 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 PXNP49023 591 aaPredicted RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 RENBPP51606 427 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CCR3P51677 355 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 SNRPD1P62314 119 aaKnown RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 GPLD1P80108 840 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 XRCC4Q13426 336 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 ENPP2Q13822 863 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 RFTN1Q14699 578 aaPredicted RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 SLC45A4Q5BKX6 768 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CARD16Q5EG05 197 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 C9orf64Q5T6V5 341 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 HEATR6Q6AI08 1181 aaKnown RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 TSSK4Q6SA08 328 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 DPY19L3Q6ZPD9 716 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CDKL3Q8IVW4 592 aaPredicted RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 PCDH20Q8N6Y1 951 aaKnown RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 DTWD2Q8NBA8 298 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CHST14Q8NCH0 376 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 TSTD1Q8NFU3 115 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 HMGB4Q8WW32 186 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CASKIN2Q8WXE0 1202 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZNF599Q96NL3 588 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 QKIQ96PU8 341 aaKnown RBP eCLIP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CEP44Q9C0F1 390 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 BRD8Q9H0E9 1235 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 BCCIPQ9P287 314 aaKnown RBP eCLIP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 LHX3Q9UBR4 397 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 EVLQ9UI08 416 aaPredicted RBP12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 CKAP5Q14008 2032 aa12.18□□□□□ -0.46
HMGB1P8-201ENST00000558211 PRR33A8MZF0 331 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 KRIT1O00522 736 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 MUSKO15146 869 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 INSIG1O15503 277 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 KCNN4O15554 427 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 GJB3O75712 270 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 URI1O94763 535 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 IGSF6O95976 241 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 PRLRP16471 622 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 PAFAH1B1P43034 410 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 RGRP47804 291 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 SCNN1BP51168 640 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 DGKEP52429 567 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 NRLP54845 237 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ZBTB17Q13105 803 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 CAMK2GQ13555 558 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 HNRNPDQ14103 355 aaKnown RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 PRKD1Q15139 912 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 SIX1Q15475 284 aaPredicted RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ANO7Q6IWH7 933 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 KIAA1324Q6UXG2 1013 aaKnown RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 MMAAQ8IVH4 418 aaKnown RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 OR13H1Q8NG92 308 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 OR2AP1Q8NGE2 309 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 OR2A12Q8NGT7 310 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 OR2T3Q8NH03 318 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 GRIN3AQ8TCU5 1115 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ACTRT1Q8TDG2 376 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 HTR3CQ8WXA8 447 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 OR8D1Q8WZ84 308 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 MAML1Q92585 1016 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 ISG20Q96AZ6 181 aaKnown RBP12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 GDAP1L1Q96MZ0 367 aa12.17□□□□□ -0.46
HMGB1P8-201ENST00000558211 AGAP3Q96P47 875 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms