RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 EIF2B5Q13144 721 aaKnown RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 ACAP1Q15027 740 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 UGP2Q16851 508 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 POLNQ7Z5Q5 900 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 SRLQ86TD4 932 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 CPNE8Q86YQ8 564 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 NIPA2Q8N8Q9 360 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 ZNF548Q8NEK5 533 aaPredicted RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 HCAR2Q8TDS4 363 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 IQCDQ96DY2 449 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 CSPG4P5Q96PW8 444 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 NUP85Q9BW27 656 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 CINPQ9BW66 212 aaPredicted RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 XPO4Q9C0E2 1151 aaKnown RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 TCEAL2Q9H3H9 227 aaPredicted RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 PCDH12Q9NPG4 1184 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 IPO11Q9UI26 975 aaKnown RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 LUC7L2Q9Y383 392 aaKnown RBP16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 U3KQA8 63 aa16.36■□□□□ 0.21
AC027088.1-201ENST00000557966 ARID1BQ8NFD5 2236 aaPredicted RBP16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 PEX11BO96011 259 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 C6P13671 934 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 MMP12P39900 470 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 CSNK1DP48730 415 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 DAB2P98082 770 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 SLC10A7Q0GE19 358 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 ELP6Q0PNE2 266 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 ILKQ13418 452 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 PIGHQ14442 188 aaPredicted RBP16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 GRM3Q14832 879 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 IRF4Q15306 451 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 ALKBH5Q6P6C2 394 aaKnown RBP16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 RBFAQ8N0V3 343 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 ECHDC3Q96DC8 303 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 ZNF641Q96N77 438 aaPredicted RBP16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 TUBGCP5Q96RT8 1024 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 PCDH18Q9HCL0 1135 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 NLGN3Q9NZ94 848 aa16.35■□□□□ 0.21
AC027088.1-201ENST00000557966 K7ESM1 405 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 SCAMP1O15126 338 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 CDK4P11802 303 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 PTMSP20962 102 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 XPAP23025 273 aaPredicted RBP16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 ARL4AP40617 200 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 SUOXP51687 545 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 INSM1Q01101 510 aaPredicted RBP16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 CYP4F3Q08477 520 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 RALGDSQ12967 914 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 TARDBPQ13148 414 aaKnown RBP eCLIP16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 RFTN1Q14699 578 aaPredicted RBP16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 LBRQ14739 615 aaKnown RBP16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 WSCD2Q2TBF2 565 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 BOLA3Q53S33 107 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 CCDC122Q5T0U0 273 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 BRAT1Q6PJG6 821 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 LZTR1Q8N653 840 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 TEKT4Q8WW24 435 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 RFFLQ8WZ73 363 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 APOLD1Q96LR9 279 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 ATP13A3Q9H7F0 1226 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 DKK4Q9UBT3 224 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 IP6K2Q9UHH9 426 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 ATP8A1Q9Y2Q0 1164 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 RAXQ9Y2V3 346 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 DMXL2Q8TDJ6 3036 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 CELSR3Q9NYQ7 3312 aa16.34■□□□□ 0.21
AC027088.1-201ENST00000557966 TTC24A2A3L6 582 aaPredicted RBP16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 H3BM21 787 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 CD48P09326 243 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 ALPPL2P10696 532 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 CKMT1AP12532 417 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 JUPP14923 745 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 JUNDP17535 347 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 SERPINA4P29622 427 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 HNRNPH3P31942 346 aaKnown RBP16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 HNF1BP35680 557 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 LIG3P49916 1009 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 YPEL5P62699 121 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 CFAP58Q5T655 872 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 TMCO4Q5TGY1 634 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 TMCO3Q6UWJ1 677 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 MACC1Q6ZN28 852 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 NYAP1Q6ZVC0 841 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 PGBD5Q8N414 524 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 PDCD7Q8N8D1 485 aaKnown RBP16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 ZNF564Q8TBZ8 553 aaPredicted RBP16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 LMX1AQ8TE12 382 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 PSKH2Q96QS6 385 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 C1QTNF7Q9BXJ2 289 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 PACSIN1Q9BY11 444 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 SEPT3Q9UH03 358 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 LRRK1Q38SD2 2015 aa16.33■□□□□ 0.2
AC027088.1-201ENST00000557966 NEMP2A6NFY4 417 aa16.32■□□□□ 0.2
AC027088.1-201ENST00000557966 AQP9O43315 295 aa16.32■□□□□ 0.2
AC027088.1-201ENST00000557966 MAFKO60675 156 aa16.32■□□□□ 0.2
AC027088.1-201ENST00000557966 GM2AP17900 193 aa16.32■□□□□ 0.2
AC027088.1-201ENST00000557966 CR2P20023 1033 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms