RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ATP1A1P05023 1023 aaKnown RBP14.46□□□□□ -0.09
USP3-205ENST00000557884 RBP3P10745 1247 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 CD86P42081 329 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 XRCC4Q13426 336 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 TEX44Q53QW1 395 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 RALGPS1Q5JS13 557 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 ALG1LQ6GMV1 187 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 TCEAL6Q6IPX3 200 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 BRAT1Q6PJG6 821 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 SYT12Q8IV01 421 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 CDKL3Q8IVW4 592 aaPredicted RBP14.46□□□□□ -0.09
USP3-205ENST00000557884 HTR3CQ8WXA8 447 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 ATG4AQ8WYN0 398 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 TCEAL3Q969E4 200 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 EBF2Q9HAK2 575 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 PCDH12Q9NPG4 1184 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 KLHL8Q9P2G9 620 aaPredicted RBP14.46□□□□□ -0.09
USP3-205ENST00000557884 JRKLQ9Y4A0 524 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 PCDHB9Q9Y5E1 797 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 EP300Q09472 2414 aaPredicted RBP14.46□□□□□ -0.09
USP3-205ENST00000557884 LAMA1P25391 3075 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 ZNF292O60281 2723 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 OTOGLQ3ZCN5 2332 aa14.46□□□□□ -0.1
USP3-205ENST00000557884 AREL1O15033 823 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 KCNN4O15554 427 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 MTSS1O43312 755 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 HTRA2O43464 458 aaPredicted RBP14.45□□□□□ -0.1
USP3-205ENST00000557884 AP1G1O43747 822 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 SOCS5O75159 536 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 CPP00450 1065 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 CFIP05156 583 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 PRLRP16471 622 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 CD27P26842 260 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 CCR5P51681 352 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 GNG11P61952 73 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 SF3A2Q15428 464 aaKnown RBP14.45□□□□□ -0.1
USP3-205ENST00000557884 UGP2Q16851 508 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 ARMC12Q5T9G4 340 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 HORMAD1Q86X24 394 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 ZNF567Q8N184 647 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 TTC13Q8NBP0 860 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 HCAR2Q8TDS4 363 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 DNASE2BQ8WZ79 361 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 RAB7BQ96AH8 199 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 ECHDC3Q96DC8 303 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 TEKT5Q96M29 485 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 RBM15Q96T37 977 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP3-205ENST00000557884 MYOCQ99972 504 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 ORAI3Q9BRQ5 295 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 WRAP53Q9BUR4 548 aaKnown RBP14.45□□□□□ -0.1
USP3-205ENST00000557884 GLOD4Q9HC38 313 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 FSCN3Q9NQT6 498 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 ZFR2Q9UPR6 939 aaKnown RBP14.45□□□□□ -0.1
USP3-205ENST00000557884 NUMA1Q14980 2115 aa14.45□□□□□ -0.1
USP3-205ENST00000557884 PIEZO1Q92508 2521 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 IGLON5A6NGN9 336 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 A8MX80 341 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SLC31A1O15431 190 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 PGLSO95336 258 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 FGGP02679 453 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 MMP2P08253 660 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SERPINF2P08697 491 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 CTPS1P17812 591 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 NFKB1P19838 968 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 CES1P23141 567 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 MSNP26038 577 aaKnown RBP14.44□□□□□ -0.1
USP3-205ENST00000557884 CD68P34810 354 aaPredicted RBP14.44□□□□□ -0.1
USP3-205ENST00000557884 FAM193AP78312 1265 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SKOR1P84550 965 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 ZNF284Q2VY69 593 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 PLA2G2CQ5R387 149 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 ERAP2Q6P179 960 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 LAYNQ6UX15 382 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 PRPF39Q86UA1 669 aaKnown RBP14.44□□□□□ -0.1
USP3-205ENST00000557884 TRIM69Q86WT6 500 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SPATA22Q8NHS9 363 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 CXorf40AQ8TE69 158 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 C1orf54Q8WWF1 131 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 FEM1CQ96JP0 617 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SLC6A18Q96N87 628 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SLC25A51Q9H1U9 297 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 FZD3Q9NPG1 666 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 VPS45Q9NRW7 570 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 SEMA4GQ9NTN9 838 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 UBP1Q9NZI7 540 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 DNPEPQ9ULA0 475 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 CHKBQ9Y259 395 aa14.44□□□□□ -0.1
USP3-205ENST00000557884 RIF1Q5UIP0 2472 aaKnown RBP14.44□□□□□ -0.1
USP3-205ENST00000557884 A0A1W2PPC4 97 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 C10orf142B7Z368 130 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 RIOK3O14730 519 aaKnown RBP14.43□□□□□ -0.1
USP3-205ENST00000557884 WNT9AO14904 365 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 BCAT2O15382 392 aaPredicted RBP14.43□□□□□ -0.1
USP3-205ENST00000557884 LATO43561 262 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 TSPAN6O43657 245 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 MMP20O60882 483 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 PDHA1P08559 390 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 GNSP15586 552 aa14.43□□□□□ -0.1
USP3-205ENST00000557884 TGM1P22735 817 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms