RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 MLXIPLQ9NP71 852 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 GDE1Q9NZC3 331 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.57□□□□□ -0.45e-12■■□□□ 11.4
SHMT2-233ENST00000557529 IL1RAPL1Q9NZN1 696 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 SLC2A6Q9UGQ3 507 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 GGA2Q9UJY4 613 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CHKBQ9Y259 395 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 FCF1Q9Y324 198 aaKnown RBP12.57□□□□□ -0.4
SHMT2-233ENST00000557529 EPOPA6NHQ4 379 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 LDB2O43679 373 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 IGSF6O95976 241 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 MT-CO1P00395 513 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ARNTP27540 789 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 HLA-FP30511 346 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ACVR1Q04771 509 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 TRAF2Q12933 501 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 RARS2Q5T160 578 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 NEPROQ6NW34 567 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 LVRNQ6Q4G3 990 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 CPLX4Q7Z7G2 160 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 RNF135Q8IUD6 432 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 NPAS3Q8IXF0 933 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ADGRG2Q8IZP9 1017 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 NDUFAF2Q8N183 169 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 GDAP1Q8TB36 358 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PTPRN2Q92932 1015 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ISL2Q96A47 359 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ISG20Q96AZ6 181 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 TIFAQ96CG3 184 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ZNF317Q96PQ6 595 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PAIP2Q9BPZ3 127 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 MCMBPQ9BTE3 642 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 CEP44Q9C0F1 390 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 RHOJQ9H4E5 214 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 NSUN3Q9H649 340 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 DUS2Q9NX74 493 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 OBP2AQ9NY56 170 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 HACD3Q9P035 362 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 SLC25A13Q9UJS0 675 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 INTS6Q9UL03 887 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 HS3ST2Q9Y278 367 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 WNT6Q9Y6F9 365 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 MIA3Q5JRA6 1907 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 DOCK6Q96HP0 2047 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 K7ERQ8 282 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 TPP1O14773 563 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 SOCS5O75159 536 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ADH1CP00326 375 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PRLP01236 227 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ALDOAP04075 364 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 MPOP05164 745 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 VIMP08670 466 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 TYK2P29597 1187 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 BMP8BP34820 402 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 CRHR1P34998 444 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 MAGEA12P43365 314 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 RPL26P61254 145 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PRAMEP78395 509 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 TAF1AQ15573 450 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 SMAD1Q15797 465 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 FUT11Q495W5 492 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ATXN7L2Q5T6C5 722 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 RGS9BPQ6ZS82 235 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 GALNT7Q86SF2 657 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ZC3HC1Q86WB0 502 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 AHI1Q8N157 1196 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 DCLK2Q8N568 766 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 EFHBQ8N7U6 833 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 C2CD4AQ8NCU7 369 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 LPCAT1Q8NF37 534 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 OR13J1Q8NGT2 312 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ZNF473Q8WTR7 871 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 STYXQ8WUJ0 223 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 OSCP1Q8WVF1 389 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 VPS39Q96JC1 886 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 NSMCE3Q96MG7 304 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 ASB16Q96NS5 453 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 SRPK1Q96SB4 655 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 VPS11Q9H270 941 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 MFSD1Q9H3U5 465 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 IGFLR1Q9H665 355 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PCMTD2Q9NV79 361 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 DCDC2Q9UHG0 476 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 RPL26L1Q9UNX3 145 aaKnown RBP12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PLLPQ9Y342 182 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 PCDHGC4Q9Y5F7 938 aa12.56□□□□□ -0.4
SHMT2-233ENST00000557529 C2orf81A6NN90 581 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 TCP11X1B4DZS4 312 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 ANKRD66B4E2M5 251 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GOLGA8TH3BQL2 631 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 HOXC11O43248 304 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 SMAD6O43541 496 aaKnown RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GLRA3O75311 464 aa12.55□□□□□ -0.4
SHMT2-233ENST00000557529 RPP40O75818 363 aaKnown RBP12.55□□□□□ -0.4
SHMT2-233ENST00000557529 GSRP00390 522 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms