RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 SYVN1Q86TM6 617 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 GPBP1Q86WP2 473 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 ACBD4Q8NC06 268 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 TMIEQ8NEW7 156 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 CCL4L1Q8NHW4 92 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 KIAA1524Q8TCG1 905 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 ELMO3Q96BJ8 720 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 PPP1R16AQ96I34 528 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 ALPK1Q96QP1 1244 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 DPYSL5Q9BPU6 564 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 CBWD1Q9BRT8 395 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-226ENST00000556971 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
ABCD4-226ENST00000556971 PCIF1Q9H4Z3 704 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 TMEM63CQ9P1W3 806 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-226ENST00000556971 NBEAL2Q6ZNJ1 2754 aa12.23□□□□□ -0.45
ABCD4-226ENST00000556971 CHD3Q12873 2000 aaKnown RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 JRKO75564 520 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 CDKL5O76039 1030 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 TNFP01375 233 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 PRNPP04156 253 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 CCNYL3P0C7X3 344 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 TRIM49P0CI25 452 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 TRIM49CP0CI26 452 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 PTPN4P29074 926 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 GPR3P46089 330 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 BMP2KLQ5H9B9 411 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 Q6ZS92 163 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 ARHGAP22Q7Z5H3 698 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 OR2A12Q8NGT7 310 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 EDEM1Q92611 657 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 SLX1AQ9BQ83 275 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 LIME1Q9H400 295 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 RWDD1Q9H446 243 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 ZNF395Q9H8N7 513 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 PADI1Q9ULC6 663 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 PLEKHA6Q9Y2H5 1048 aa12.22□□□□□ -0.45
ABCD4-226ENST00000556971 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
ABCD4-226ENST00000556971 MASP2O00187 686 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 NEMP1O14524 444 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 AP1G1O43747 822 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 NDUFA10O95299 355 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 IDEP14735 1019 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 NFATC4Q14934 902 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 IRF4Q15306 451 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 ZSCAN30Q86W11 494 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 WDR49Q8IV35 697 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 SH2D3CQ8N5H7 860 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 RNF139Q8WU17 664 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 PATE1Q8WXA2 126 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 ASB12Q8WXK4 309 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 ELMO2Q96JJ3 720 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 TREX2Q9BQ50 279 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-226ENST00000556971 RAB34Q9BZG1 259 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 BRD8Q9H0E9 1235 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 XYLT2Q9H1B5 865 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 ZDHHC6Q9H6R6 413 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 LHX9Q9NQ69 397 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 SIDT1Q9NXL6 827 aaKnown RBP12.21□□□□□ -0.45
ABCD4-226ENST00000556971 PDP2Q9P2J9 529 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 MAPK8IP1Q9UQF2 711 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 BTRCQ9Y297 605 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 PLEKHM1Q9Y4G2 1056 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 CSAG2Q9Y5P2 127 aa12.21□□□□□ -0.45
ABCD4-226ENST00000556971 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 LEFTY1O75610 366 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 ECEL1O95672 775 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 PLEKP08567 350 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 HTR1BP28222 390 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 SQSTM1Q13501 440 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 MS4A13Q5J8X5 152 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 FAAH2Q6GMR7 532 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 C17orf82Q86X59 251 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 ZNF761Q86XN6 746 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 RASGRP3Q8IV61 690 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 ULK2Q8IYT8 1036 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 ZADH2Q8N4Q0 377 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 TP53I13Q8NBR0 393 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 ZDHHC1Q8WTX9 485 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 OR1E3Q8WZA6 343 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 TMEM168Q9H0V1 697 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 ARHGEF38Q9NXL2 777 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 KLHL3Q9UH77 587 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 IL36AQ9UHA7 158 aa12.2□□□□□ -0.46
ABCD4-226ENST00000556971 NOVA2Q9UNW9 492 aaKnown RBP12.2□□□□□ -0.46
ABCD4-226ENST00000556971 A0A0U1RQS6 177 aa12.19□□□□□ -0.46
ABCD4-226ENST00000556971 A0A1W2PQJ5 194 aa12.19□□□□□ -0.46
ABCD4-226ENST00000556971 K7ELQ4 463 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-226ENST00000556971 TOR1BO14657 336 aa12.19□□□□□ -0.46
ABCD4-226ENST00000556971 SPTLC2O15270 562 aa12.19□□□□□ -0.46
ABCD4-226ENST00000556971 PPM1DO15297 605 aa12.19□□□□□ -0.46
ABCD4-226ENST00000556971 IGLV3-27P01718 113 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms