RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 NUDT6P53370 316 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 CLDN2P57739 230 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 MPP1Q00013 466 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 TRAF1Q13077 416 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 ITGADQ13349 1161 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 ARHGEF6Q15052 776 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 PPP2R5BQ15173 497 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 GSTA3Q16772 222 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 ZNF284Q2VY69 593 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 PRAMEF19Q5SWL8 479 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 WDR78Q5VTH9 848 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 ATF7IPQ6VMQ6 1270 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 NEK10Q6ZWH5 1172 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 H1FNTQ75WM6 255 aaPredicted RBP4.33□□□□□ -1.72
FCF1-208ENST00000556814 RSRC2Q7L4I2 434 aaKnown RBP4.33□□□□□ -1.72
FCF1-208ENST00000556814 R3HCC1LQ7Z5L2 792 aaKnown RBP4.33□□□□□ -1.72
FCF1-208ENST00000556814 MB21D2Q8IYB1 491 aaPredicted RBP4.33□□□□□ -1.72
FCF1-208ENST00000556814 SNAPC3Q92966 411 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 BBS4Q96RK4 519 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 NTPCRQ9BSD7 190 aaKnown RBP4.33□□□□□ -1.72
FCF1-208ENST00000556814 MSTO1Q9BUK6 570 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 ZHX3Q9H4I2 956 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 EBF3Q9H4W6 596 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 PRKRIP1Q9H875 184 aaPredicted RBP4.33□□□□□ -1.72
FCF1-208ENST00000556814 SMYD2Q9NRG4 433 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 MYO6Q9UM54 1294 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 A4GNTQ9UNA3 340 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 CAMK2AQ9UQM7 478 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 FAM96BQ9Y3D0 163 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 INSL5Q9Y5Q6 135 aa4.33□□□□□ -1.72
FCF1-208ENST00000556814 KDM3AQ9Y4C1 1321 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 A0A1W2PQM1 296 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 LRRC53A6NM62 1247 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 HSPB2A8KAH6 182 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 HMGB1P1B2RPK0 211 aaPredicted RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 TAF4O00268 1085 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 RTN3O95197 1032 aaPredicted RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 CD4P01730 458 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 HOXB5P09067 269 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 SNHG28P0DPA3 235 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 UBL4AP11441 157 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 CD58P19256 250 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 CHATP28329 748 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 EPHA8P29322 1005 aaPredicted RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 HSPB2Q16082 182 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 TCTN1Q2MV58 587 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 ESCO2Q56NI9 601 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 TXNDC8Q6A555 127 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 FAAH2Q6GMR7 532 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 DSTYKQ6XUX3 929 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 SLC46A3Q7Z3Q1 461 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 PELI3Q8N2H9 469 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 PRR26Q8N8Z3 221 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 MIGA1Q8NAN2 632 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 ASB5Q8WWX0 329 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 OIT3Q8WWZ8 545 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 FBXL8Q96CD0 374 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 C7orf26Q96N11 449 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 NR1H4Q96RI1 486 aaPredicted RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 LBHD1Q9BQE6 289 aaPredicted RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 MXRA8Q9BRK3 442 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 MMTAG2Q9BU76 263 aaKnown RBP4.32□□□□□ -1.72
FCF1-208ENST00000556814 HEMGNQ9BXL5 484 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 NUF2Q9BZD4 464 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 BRF2Q9HAW0 419 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 SMC4Q9NTJ3 1288 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 TMEM51Q9NW97 253 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 PCDHA7Q9UN72 937 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 NAALADL1Q9UQQ1 740 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 PTGDR2Q9Y5Y4 395 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 A3GALT2U3KPV4 340 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 TTC3P53804 2025 aa4.32□□□□□ -1.72
FCF1-208ENST00000556814 UTYO14607 1347 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 A0A0U1RQF3 1178 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 A0A1B0GVT2 93 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 FAM90A8PA6NJQ4 464 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 B4E171 279 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 INAFM1C9JVW0 142 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 SEC14L2O76054 403 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 NDUFB4O95168 129 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 TFP02787 698 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 FAM90A13PP0C7W8 464 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 FAM90A24PP0C7X0 464 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 HSPA1AP0DMV8 641 aaKnown RBP4.31□□□□□ -1.72
FCF1-208ENST00000556814 HSPA1BP0DMV9 641 aaKnown RBP4.31□□□□□ -1.72
FCF1-208ENST00000556814 GPTP24298 496 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 ARRB2P32121 409 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 TSPAN7P41732 249 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 RFX5P48382 616 aaPredicted RBP4.31□□□□□ -1.72
FCF1-208ENST00000556814 CXCR3P49682 368 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 CCR9P51686 369 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 PMS2P54278 862 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 LINC00205P59089 165 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 Q0VFX4 171 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 SOWAHAQ2M3V2 549 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 TDRD12Q587J7 1177 aaKnown RBP4.31□□□□□ -1.72
FCF1-208ENST00000556814 FAM180BQ6P0A1 224 aa4.31□□□□□ -1.72
FCF1-208ENST00000556814 GSTA5Q7RTV2 222 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms