RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 MRPS23Q9Y3D9 190 aaKnown RBP18.82■□□□□ 0.6
SDR39U1-218ENST00000556262 HEATR9A2RTY3 570 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 COPEO14579 308 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 GRTP1Q5TC63 336 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 HHATQ5VTY9 493 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 ARID3BQ8IVW6 561 aaPredicted RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 FIBINQ8TAL6 211 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 TRIB3Q96RU7 358 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 SRPK1Q96SB4 655 aaKnown RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 RBBP8Q99708 897 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 LHX3Q9UBR4 397 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 KCTD3Q9Y597 815 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 PCDHGC4Q9Y5F7 938 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 CCL22O00626 93 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 TPP1O14773 563 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 SMAD6O43541 496 aaKnown RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 CYBBP04839 570 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 SF3A3Q12874 501 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■□□□ 12.4
SDR39U1-218ENST00000556262 ZNF77Q15935 545 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 SEPT7Q16181 437 aaKnown RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 SPRED3Q2MJR0 410 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 ATXN7L2Q5T6C5 722 aaPredicted RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 TSTD2Q5T7W7 516 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 PPP2R2DQ66LE6 453 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 TIFABQ6ZNK6 161 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 DENND6AQ8IWF6 608 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 NDUFAF2Q8N183 169 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 VN1R2Q8NFZ6 395 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 BLOC1S5Q8TDH9 187 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 SMG7Q92540 1137 aaKnown RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 FAM111AQ96PZ2 611 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 C2orf49Q9BVC5 232 aaPredicted RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 DPP7Q9UHL4 492 aa18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 INTS6Q9UL03 887 aaKnown RBP18.81■□□□□ 0.6
SDR39U1-218ENST00000556262 TM9SF1O15321 606 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 EPOP01588 193 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 FGF1P05230 155 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 PDHA1P08559 390 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 HLA-DPA1P20036 260 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 CCNFP41002 786 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 PDE1BQ01064 536 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 CTBP1Q13363 440 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 INO80DQ53TQ3 878 aaPredicted RBP18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 RNF43Q68DV7 783 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 FSTL4Q6MZW2 842 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 OR13J1Q8NGT2 312 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 SMIM14Q96QK8 99 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 NUDCD1Q96RS6 583 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 RANBP9Q96S59 729 aa18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 KIAA1522Q9P206 1035 aaPredicted RBP18.8■□□□□ 0.6
SDR39U1-218ENST00000556262 WDR91A4D1P6 747 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 MROH6A6NGR9 719 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 NEDD8-MDP1E9PL57 170 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 RFXAPO00287 272 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 BUD23O43709 281 aaKnown RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 NDST3O95803 873 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 HLA-FP30511 346 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 GMPRP36959 345 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 RHOAP61586 193 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 PTPRCAPQ14761 206 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 DUSP6Q16828 381 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 PLEKHG6Q3KR16 790 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 DCLK2Q8N568 766 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ACVR1CQ8NER5 493 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 SPOCK2Q92563 424 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 TM6SF2Q9BZW4 377 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ABCB8Q9NUT2 735 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 GGT7Q9UJ14 662 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 MTO1Q9Y2Z2 717 aaKnown RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 RAI2Q9Y5P3 530 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ARL5AQ9Y689 179 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 WNT6Q9Y6F9 365 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 C2orf16Q68DN1 1984 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 EYSQ5T1H1 3165 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 CCDC85CA6NKD9 419 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ZNF197O14709 1029 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 LDB2O43679 373 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 PRLP01236 227 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 TAC1P20366 129 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 GABRB3P28472 473 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 SPRP35270 261 aaPredicted RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ETV4P43268 484 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 LIMK2P53671 638 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 MPP1Q00013 466 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 CCDC15Q0P6D6 951 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ZKSCAN8Q15776 578 aaPredicted RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 PPM1JQ5JR12 505 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 ASTLQ6HA08 431 aaPredicted RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 KIAA0930Q6ICG6 404 aaPredicted RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 CYB5D1Q6P9G0 228 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 CMC1Q7Z7K0 106 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 PNPLA1Q8N8W4 532 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 PDCD6IPQ8WUM4 868 aaKnown RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 LMLNQ96KR4 655 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 RPL10LQ96L21 214 aaKnown RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 MCMBPQ9BTE3 642 aa18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 TDRD1Q9BXT4 1180 aaKnown RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 IQCGQ9H095 443 aaKnown RBP18.79■□□□□ 0.6
SDR39U1-218ENST00000556262 AHSGP02765 367 aa18.78■□□□□ 0.6
SDR39U1-218ENST00000556262 PAMP19021 973 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms