RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 FSCN1Q16658 493 aaKnown RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 TMEM198Q66K66 360 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 NEPROQ6NW34 567 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ESRP1Q6NXG1 681 aaKnown RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 BHLHA9Q7RTU4 235 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 CTU1Q7Z7A3 348 aaKnown RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 SPATA24Q86W54 205 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 CEP97Q8IW35 865 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 LSMEM2Q8N112 164 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 THEM5Q8N1Q8 247 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 MARVELD2Q8N4S9 558 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ZSCAN18Q8TBC5 510 aaPredicted RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 HEXDCQ8WVB3 486 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 DPF3Q92784 378 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 USP13Q92995 863 aaPredicted RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
TDP1-213ENST00000555880 MARK4Q96L34 752 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ACBD6Q9BR61 282 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 TRPV6Q9H1D0 765 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ACSS2Q9NR19 701 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 TMEM30AQ9NV96 361 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 RBM22Q9NW64 420 aaKnown RBP eCLIP7.06□□□□□ -1.28
TDP1-213ENST00000555880 ADA2Q9NZK5 511 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 CACNG4Q9UBN1 327 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 FBXO5Q9UKT4 447 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 ST3GAL5Q9UNP4 418 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 GIT1Q9Y2X7 761 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 TRPV2Q9Y5S1 764 aa7.06□□□□□ -1.28
TDP1-213ENST00000555880 PATJQ8NI35 1801 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 MEIS3P2A8K0S8 358 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TRIM38O00635 465 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 IRAK2O43187 625 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 AP1G1O43747 822 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 MAFKO60675 156 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 GPC4O75487 556 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TNFAIP8O95379 198 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 PAX3P23760 479 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 PMLP29590 882 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 HOXC13P31276 330 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 ADRA1AP35348 466 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 SCNN1GP51170 649 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 CLCN5P51795 746 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TAS2R39P59534 338 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 ILF2Q12905 390 aaKnown RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 CEACAM7Q14002 265 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 SQLEQ14534 574 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TAF1CQ15572 869 aaPredicted RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 UPP1Q16831 310 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 C11orf91Q3C1V1 193 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TIGD5Q53EQ6 642 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 PLA2G2CQ5R387 149 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 DENND5AQ6IQ26 1287 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 UGT2A3Q6UWM9 527 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 ARHGAP36Q6ZRI8 547 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 SLC22A9Q8IVM8 553 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 ARHGAP12Q8IWW6 846 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 SPATA6LQ8N4H0 392 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 KDM1BQ8NB78 822 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TXNDC5Q8NBS9 432 aaKnown RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 RIN3Q8TB24 985 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 LPPQ93052 612 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TOP1MTQ969P6 601 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 MOCOSQ96EN8 888 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 SGF29Q96ES7 293 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 GPR78Q96P69 363 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 OMDQ99983 421 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 SMOC2Q9H3U7 446 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 COPS7BQ9H9Q2 264 aaPredicted RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 TRPC7Q9HCX4 862 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TREX1Q9NSU2 369 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 FNIP2Q9P278 1114 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 CPA4Q9UI42 421 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 PACSIN3Q9UKS6 424 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 Q9Y3F1 56 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 MYO16Q9Y6X6 1858 aa7.05□□□□□ -1.28
TDP1-213ENST00000555880 TDRD15B5MCY1 1934 aaKnown RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 NYNRINQ9P2P1 1898 aaKnown RBP7.05□□□□□ -1.28
TDP1-213ENST00000555880 TMEM233B4DJY2 109 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 PSMD12O00232 456 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 SDHDO14521 159 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 UBDO15205 165 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 GPR182O15218 404 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 KPNA6O60684 536 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 B3GAT3O94766 335 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 IPO13O94829 963 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 CRTAMO95727 393 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 CLPTM1O96005 669 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 IGLV3-25P01717 112 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 JUNP05412 331 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 HLA-DQB2P05538 268 aa7.04□□□□□ -1.28
TDP1-213ENST00000555880 LTA4HP09960 611 aaKnown RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 ZNF865P0CJ78 1059 aaPredicted RBP7.04□□□□□ -1.28
TDP1-213ENST00000555880 HNRNPLP14866 589 aaKnown RBP eCLIP7.04□□□□□ -1.28
TDP1-213ENST00000555880 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms