RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SGCGQ13326 291 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 UGP2Q16851 508 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 BRAT1Q6PJG6 821 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 KYAT3Q6YP21 454 aaKnown RBP20.69■□□□□ 0.9
VTI1B-205ENST00000555543 KANSL1Q7Z3B3 1105 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 PTAR1Q7Z6K3 402 aaPredicted RBP20.69■□□□□ 0.9
VTI1B-205ENST00000555543 GLRX5Q86SX6 157 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 MAP7D3Q8IWC1 876 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 HCAR2Q8TDS4 363 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 ECHDC3Q96DC8 303 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 GPR27Q9NS67 375 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 HS3ST3A1Q9Y663 406 aa20.69■□□□□ 0.9
VTI1B-205ENST00000555543 TPRP12270 2363 aaKnown RBP20.69■□□□□ 0.9
VTI1B-205ENST00000555543 LRRD1A4D1F6 860 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 C3orf70A6NLC5 250 aaPredicted RBP20.68■□□□□ 0.9
VTI1B-205ENST00000555543 A6NNZ2 444 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 TRAFD1O14545 582 aaPredicted RBP20.68■□□□□ 0.9
VTI1B-205ENST00000555543 FTH1P19P0C7X4 201 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 FECHP22830 423 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 XPAP23025 273 aaPredicted RBP20.68■□□□□ 0.9
VTI1B-205ENST00000555543 MMP12P39900 470 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 GARSP41250 739 aaKnown RBP20.68■□□□□ 0.9
VTI1B-205ENST00000555543 RENBPP51606 427 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 SUOXP51687 545 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 MAXP61244 160 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 AP1S1P61966 158 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 SEMG2Q02383 582 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 GBE1Q04446 702 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 BCL2L1Q07817 233 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 TMEM52BQ4KMG9 183 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 ZFYVE27Q5T4F4 411 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 Q6ZSR6 202 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 OXR1Q8N573 874 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 CXorf40AQ8TE69 158 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 LRRN4Q8WUT4 740 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 ASB12Q8WXK4 309 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 LENG8Q96PV6 779 aaPredicted RBP20.68■□□□□ 0.9
VTI1B-205ENST00000555543 PANX2Q96RD6 677 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 MGME1Q9BQP7 344 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 TOR4AQ9NXH8 423 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 COQ6Q9Y2Z9 468 aa20.68■□□□□ 0.9
VTI1B-205ENST00000555543 LRRK1Q38SD2 2015 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 SOWAHDA6NJG2 315 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
VTI1B-205ENST00000555543 YKT6O15498 198 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 SDC3O75056 442 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 ITGAVP06756 1048 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 IGFALSP35858 605 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 ELP6Q0PNE2 266 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 SLC10A2Q12908 348 aaPredicted RBP20.67■□□□□ 0.9
VTI1B-205ENST00000555543 TPRG1LQ5T0D9 272 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 CFAP58Q5T655 872 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 SLCO6A1Q86UG4 719 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 CCDC170Q8IYT3 715 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 PNPLA1Q8N8W4 532 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 DENND6BQ8NEG7 585 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 CENPTQ96BT3 561 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 GOLPH3Q9H4A6 298 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 NOD2Q9HC29 1040 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 ATP8A1Q9Y2Q0 1164 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 PCDHA13Q9Y5I0 950 aa20.67■□□□□ 0.9
VTI1B-205ENST00000555543 FPGTO14772 594 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 HYAL3O43820 417 aaPredicted RBP20.66■□□□□ 0.9
VTI1B-205ENST00000555543 TM7SF2O76062 418 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 ATXN1LP0C7T5 689 aaKnown RBP20.66■□□□□ 0.9
VTI1B-205ENST00000555543 COMTP21964 271 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 HSPA9P38646 679 aaKnown RBP20.66■□□□□ 0.9
VTI1B-205ENST00000555543 MMP13P45452 471 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 MARC1Q5VT66 337 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 LRRC49Q8IUZ0 686 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 TEX26Q8N6G2 289 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 PLD5Q8N7P1 536 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 TP53I13Q8NBR0 393 aaPredicted RBP20.66■□□□□ 0.9
VTI1B-205ENST00000555543 CNTNAP3BQ96NU0 1288 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 RNF157Q96PX1 679 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 NUDCD1Q96RS6 583 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 CDC6Q99741 560 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 CNTNAP3Q9BZ76 1288 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 NT5MQ9NPB1 228 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 MBNL1Q9NR56 388 aaKnown RBP20.66■□□□□ 0.9
VTI1B-205ENST00000555543 DTLQ9NZJ0 730 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 PCDHGC4Q9Y5F7 938 aa20.66■□□□□ 0.9
VTI1B-205ENST00000555543 COL5A1P20908 1838 aaPredicted RBP20.65■□□□□ 0.9
VTI1B-205ENST00000555543 KRT1P04264 644 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 C6P13671 934 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 TNNT1P13805 278 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 CYLC1P35663 651 aaPredicted RBP20.65■□□□□ 0.9
VTI1B-205ENST00000555543 HADHBP55084 474 aaKnown RBP20.65■□□□□ 0.9
VTI1B-205ENST00000555543 PFN3P60673 137 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 RALGDSQ12967 914 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 FZD2Q14332 565 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 INAVAQ3KP66 663 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 LRRC38Q5VT99 294 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 ERAP2Q6P179 960 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 FAM174AQ8TBP5 190 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 NSMCE1Q8WV22 266 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 MAML1Q92585 1016 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 SCNM1Q9BWG6 230 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 SCUBE2Q9NQ36 999 aa20.65■□□□□ 0.9
VTI1B-205ENST00000555543 ASPMQ8IZT6 3477 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms