RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 GLOD4Q9HC38 313 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF711Q9Y462 761 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PTGESO14684 152 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PYGLP06737 847 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PCNAP12004 261 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 MYL4P12829 197 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 OR1G1P47890 313 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PPIDQ08752 370 aaKnown RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 TBCELQ5QJ74 424 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 OVOS1Q6IE37 1185 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 CENPLQ8N0S6 344 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 FAM47BQ8NA70 645 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 VPS50Q96JG6 964 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PFDN4Q9NQP4 134 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 TRHDEQ9UKU6 1024 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 USP3Q9Y6I4 520 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 TRPC5OSA6NMA1 111 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 J3KR12 359 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 GPR32O75388 356 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 CD52P31358 61 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 MCCD1P59942 119 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 USP46P62068 366 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ADGRE1Q14246 886 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PSMD5Q16401 504 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 RAP1GAP2Q684P5 730 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 CHST15Q7LFX5 561 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 C14orf80Q86SX3 495 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 TMEM135Q86UB9 458 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 LILRA2Q8N149 483 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 PTGR2Q8N8N7 351 aaPredicted RBP11.95□□□□□ -0.5
XRCC3-208ENST00000554811 TBATAQ96M53 351 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 CASS4Q9NQ75 786 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 ADAM28Q9UKQ2 775 aa11.95□□□□□ -0.5
XRCC3-208ENST00000554811 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 CASQ2O14958 399 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 MTSS1O43312 755 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 APOA4P06727 396 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 GRK4P32298 578 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 MAGEA6P43360 314 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 GPR15P49685 360 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 KPNA2P52292 529 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF235Q14590 738 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 RBBP7Q16576 425 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 ZMIZ2Q8NF64 920 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 FAM110BQ8TC76 370 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 SEPT5Q99719 369 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 NFKBIZQ9BYH8 718 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 WDR6Q9NNW5 1121 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 DMAP1Q9NPF5 467 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 FAM105AQ9NUU6 356 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 UXTQ9UBK9 157 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 TMEM114B3SHH9 223 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 H3BMM5 538 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 PARNO95453 639 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 F9P00740 461 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 PGFP49763 221 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 GEMP55040 296 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 PPP1R8Q12972 351 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 STX5Q13190 355 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 PAFAH1B3Q15102 231 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 C6orf10Q5SRN2 563 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 RAB44Q7Z6P3 723 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 CLVS1Q8IUQ0 354 aaPredicted RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 VPS33AQ96AX1 596 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 TMIGD2Q96BF3 282 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 STN1Q9H668 368 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 BPIFA1Q9NP55 256 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 MKS1Q9NXB0 559 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 CROTQ9UKG9 612 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 SLC27A5Q9Y2P5 690 aa11.94□□□□□ -0.5
XRCC3-208ENST00000554811 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
XRCC3-208ENST00000554811 A8MX80 341 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 NCAM2O15394 837 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TNFAIP8O95379 198 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ATP5F1P24539 256 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 YAP1P46937 504 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 PLCL1Q15111 1095 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 NEDD8Q15843 81 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 C10orf120Q5SQS8 335 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 TTC33Q6PID6 262 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 LPCAT2Q7L5N7 544 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 PARP8Q8N3A8 854 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 SMG8Q8ND04 991 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 CASP10Q92851 521 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF512Q96ME7 567 aaPredicted RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 OLFM1Q99784 485 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 MGAMO43451 1857 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 MAGEB16A2A368 324 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 UBXN8O00124 270 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 ZNF195O14628 629 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 KATNA1O75449 491 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 HSPA8P11142 646 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 MTHFD1P11586 935 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 FMO4P31512 558 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 RPL5P46777 297 aaKnown RBP11.93□□□□□ -0.5
XRCC3-208ENST00000554811 SLC10A7Q0GE19 358 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 MARC1Q5VT66 337 aa11.93□□□□□ -0.5
XRCC3-208ENST00000554811 REP15Q6BDI9 236 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms