RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SPASTQ9UBP0 616 aa12.36□□□□□ -0.43
MTHFD1-207ENST00000554677 APOBEC3BQ9UH17 382 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-207ENST00000554677 LIMA1Q9UHB6 759 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-207ENST00000554677 COQ6Q9Y2Z9 468 aa12.36□□□□□ -0.43
MTHFD1-207ENST00000554677 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
MTHFD1-207ENST00000554677 SETXQ7Z333 2677 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-207ENST00000554677 TOR1BO14657 336 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 MUSKO15146 869 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 BUB1BO60566 1050 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 IGSF6O95976 241 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 CALB1P05937 261 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 TSHRP16473 764 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 PCBP4P57723 403 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 RHOAP61586 193 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 CXADRP78310 365 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 C19orf57Q0VDD7 668 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 IRF4Q15306 451 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 NR0B2Q15466 257 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 WSCD2Q2TBF2 565 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 C6orf132Q5T0Z8 1188 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 FKBP15Q5T1M5 1219 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 SCYL2Q6P3W7 929 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 CRTC1Q6UUV9 634 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 MACC1Q6ZN28 852 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 ZSWIM9Q86XI8 627 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 HCAR2Q8TDS4 363 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 LGMNQ99538 433 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 IL12RB2Q99665 862 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 WRAP53Q9BUR4 548 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 LRRC19Q9H756 370 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 EVA1BQ9NVM1 165 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 NCKIPSDQ9NZQ3 722 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 SATB2Q9UPW6 733 aa12.35□□□□□ -0.43
MTHFD1-207ENST00000554677 TSPAN11A1L157 253 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 LGALS16A8MUM7 142 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 J3KR12 359 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 NTN3O00634 580 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 CREB3O43889 395 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 PIGNO95427 931 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 THOP1P52888 689 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 PDX1P52945 283 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 RAD51Q06609 339 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 PARP15Q460N3 678 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 C3orf38Q5JPI3 329 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 EFHC2Q5JST6 749 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 FAXCQ5TGI0 409 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 IRF2BP2Q7Z5L9 587 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 MCOLN2Q8IZK6 566 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 ZNF843Q8N446 348 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 ARFGAP1Q8N6T3 406 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 TPCN2Q8NHX9 752 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 CXorf40AQ8TE69 158 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 FUBP1Q96AE4 644 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 GRAMD1AQ96CP6 724 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 VCPIP1Q96JH7 1222 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 EXOC2Q96KP1 924 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 NSMCE3Q96MG7 304 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 CNPY3Q9BT09 278 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 SYT11Q9BT88 431 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 SUV39H2Q9H5I1 410 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 CPNE5Q9HCH3 593 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 PCDH12Q9NPG4 1184 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 TAS2R14Q9NYV8 317 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 RABGEF1Q9UJ41 708 aa12.34□□□□□ -0.43
MTHFD1-207ENST00000554677 CDRT15L2A8MXV6 281 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 TCEA3O75764 348 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 ANXA6P08133 673 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 RGRP47804 291 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 PEX5P50542 639 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 SUOXP51687 545 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 HK3P52790 923 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 AIF1P55008 147 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 PPARDQ03181 441 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 NCAPHQ15003 741 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 AGERQ15109 404 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 CA9Q16790 459 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 UGP2Q16851 508 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 ALG11Q2TAA5 492 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 DNAJC24Q6P3W2 148 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 RBM44Q6ZP01 1051 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 ZNF354CQ86Y25 554 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 DNAAF5Q86Y56 855 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 NEK11Q8NG66 645 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 SNRNP27Q8WVK2 155 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 TSACCQ96A04 125 aaPredicted RBP12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 MCEEQ96PE7 176 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 CCDC3Q9BQI4 270 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 APOOQ9BUR5 198 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 C1QTNF7Q9BXJ2 289 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 SLC13A1Q9BZW2 595 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 GPATCH2LQ9NWQ4 482 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 PADI4Q9UM07 663 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 PCDHGA8Q9Y5G5 932 aa12.33□□□□□ -0.44
MTHFD1-207ENST00000554677 ZFC3H1O60293 1989 aaKnown RBP12.32□□□□□ -0.44
MTHFD1-207ENST00000554677 KLK10O43240 276 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms