RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 DKK3Q9UBP4 350 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 FTSJ1Q9UET6 329 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 APOBEC2Q9Y235 224 aaKnown RBP10.77□□□□□ -0.69
SHMT2-213ENST00000554600 LRP4O75096 1905 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 RP1P56715 2156 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ASXL3Q9C0F0 2248 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 POM121BA6NF01 834 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 FPGTO14772 594 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 AREL1O15033 823 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 MUSKO15146 869 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 RAD51BO15315 384 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 SPINT1O43278 529 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 BUB1BO60566 1050 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 SDC3O75056 442 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 TM7SF2O76062 418 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 IPO7O95373 1038 aaKnown RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 TOP3BO95985 862 aaKnown RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 PRKCGP05129 697 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 FTH1P19P0C7X4 201 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 SPINK2P20155 84 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 KDELR1P24390 212 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 IL4RP24394 825 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 EPHA8P29322 1005 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 PMLP29590 882 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 HSPA9P38646 679 aaKnown RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 ARHGAP25P42331 645 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 MMP13P45452 471 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 CSNK1DP48730 415 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 AP1S1P61966 158 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 BNIP3Q12983 259 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 FGL2Q14314 439 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 ST3GAL2Q16842 350 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 UGP2Q16851 508 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 MARC1Q5VT66 337 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 BRAT1Q6PJG6 821 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 GCNT7Q6ZNI0 430 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 Q6ZSR6 202 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 EID2Q8N6I1 236 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 PNPLA1Q8N8W4 532 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 PCDH19Q8TAB3 1148 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 ZNF641Q96N77 438 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 ZNF830Q96NB3 372 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 PSKH2Q96QS6 385 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 C1QTNF7Q9BXJ2 289 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 MAK16Q9BXY0 300 aaKnown RBP10.76□□□□□ -0.69
SHMT2-213ENST00000554600 ERVMER34-1Q9H9K5 563 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 NT5MQ9NPB1 228 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 PCDH12Q9NPG4 1184 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 DNAJC28Q9NX36 388 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 INTUQ9ULD6 942 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 COQ6Q9Y2Z9 468 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 HYOU1Q9Y4L1 999 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 TTLL3Q9Y4R7 772 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 HS3ST3A1Q9Y663 406 aa10.76□□□□□ -0.69
SHMT2-213ENST00000554600 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 HYAL3O43820 417 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 LZTS3O60299 673 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 MAFKO60675 156 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 CBFA2T3O75081 653 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 MTA2O94776 668 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 SUOXP51687 545 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 ARSEP51690 589 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 THOP1P52888 689 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 MAXP61244 160 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 POLR2LP62875 67 aaKnown RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 NSUN2Q08J23 767 aaKnown RBP eCLIP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 PAFAH1B3Q15102 231 aaKnown RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 SHBQ15464 509 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 IFI16Q16666 785 aaKnown RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 ZNF542PQ5EBM4 170 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 NCBP2-AS2Q69YL0 99 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 KYAT3Q6YP21 454 aaKnown RBP10.75□□□□□ -0.69
SHMT2-213ENST00000554600 RFX6Q8HWS3 928 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 CCDC170Q8IYT3 715 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 CHCHD4Q8N4Q1 142 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 CCNYQ8ND76 341 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 FAM174AQ8TBP5 190 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 FAM71BQ8TC56 605 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 HCAR2Q8TDS4 363 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 SAP25Q8TEE9 199 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 RAPGEF5Q92565 580 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 VOPP1Q96AW1 172 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 BMFQ96LC9 184 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 SCNM1Q9BWG6 230 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 ATP8A1Q9Y2Q0 1164 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 PCDHA13Q9Y5I0 950 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 HEY1Q9Y5J3 304 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 ACACAQ13085 2346 aa10.75□□□□□ -0.69
SHMT2-213ENST00000554600 UNC13CQ8NB66 2214 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 AKAP13Q12802 2813 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 TSPAN11A1L157 253 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 SOWAHDA6NJG2 315 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 A8MX80 341 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 RIOK3O14730 519 aaKnown RBP10.74□□□□□ -0.69
SHMT2-213ENST00000554600 TRIM16O95361 564 aa10.74□□□□□ -0.69
SHMT2-213ENST00000554600 ATXN1LP0C7T5 689 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms