RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 PPARGC1AQ9UBK2 798 aaKnown RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 APOBEC3BQ9UH17 382 aaKnown RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 PADI4Q9UM07 663 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 CCDC187A0A096LP49 1063 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 CXorf51AA0A1B0GTR3 108 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 MMP20O60882 483 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 UGT2B4P06133 528 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 ITGA2BP08514 1039 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 HGFP14210 728 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 TIMP2P16035 220 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 SLC5A2P31639 672 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 UGT1A5P35504 534 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 EIF4A3P38919 411 aaKnown RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 CCL7P80098 99 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 CDR2Q01850 454 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 NRG1Q02297 640 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 SGCGQ13326 291 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 ATXN7L2Q5T6C5 722 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 FAM102AQ5T9C2 384 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 NAA35Q5VZE5 725 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 CCDC81Q6ZN84 652 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 TMPRSS9Q7Z410 1059 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 EMC1Q8N766 993 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 KYQ8NBH2 561 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 MSANTD4Q8NCY6 345 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 OR2AP1Q8NGE2 309 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 SLC20A1Q8WUM9 679 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 TSACCQ96A04 125 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 RAB7BQ96AH8 199 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 LIN37Q96GY3 246 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 CCNL2Q96S94 520 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 FOXP3Q9BZS1 431 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 SPASTQ9UBP0 616 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 IPO11Q9UI26 975 aaKnown RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 NOCTQ9UK39 431 aaKnown RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 ACSL6Q9UKU0 697 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
TUBB3-204ENST00000554116 STAP1Q9ULZ2 295 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 PCDHGA7Q9Y5G6 932 aa11.7□□□□□ -0.54
TUBB3-204ENST00000554116 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
TUBB3-204ENST00000554116 TERTO14746 1132 aaKnown RBP11.69□□□□□ -0.54
TUBB3-204ENST00000554116 INSIG1O15503 277 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 GSRP00390 522 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ADRA1BP35368 520 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ZNF165P49910 485 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 YPEL5P62699 121 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 NOMO3P69849 1222 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 NFKB2Q00653 900 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 FMO1Q01740 532 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 NFATC3Q12968 1075 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 C15orf59Q2T9L4 293 aaPredicted RBP11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ALG11Q2TAA5 492 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 KLHL40Q2TBA0 621 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 XKR5Q6UX68 686 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 MACC1Q6ZN28 852 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ARCQ7LC44 396 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 ARL14Q8N4G2 192 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 BTN2A2Q8WVV5 523 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 NAT6Q93015 286 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 TRIM4Q9C037 500 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 STARD5Q9NSY2 213 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 TMEM248Q9NWD8 314 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 COQ6Q9Y2Z9 468 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 SDK2Q58EX2 2172 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 CENPEQ02224 2701 aa11.69□□□□□ -0.54
TUBB3-204ENST00000554116 SPTAN1Q13813 2472 aaKnown RBP11.68□□□□□ -0.54
TUBB3-204ENST00000554116 D6RAR5 112 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 GOLGA8SH3BPF8 625 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 KRIT1O00522 736 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 PLD2O14939 933 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 TEX33O43247 280 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 LRIG2O94898 1065 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 GJB6O95452 261 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 POP4O95707 220 aaKnown RBP11.68□□□□□ -0.54
TUBB3-204ENST00000554116 CYP1A1P04798 512 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-204ENST00000554116 ANXA6P08133 673 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 CHRNB2P17787 502 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 ETV5P41161 510 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 HK3P52790 923 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 ATP11AP98196 1134 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 SPIDRQ14159 915 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 IRF4Q15306 451 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 TCEA2Q15560 299 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 WSCD2Q2TBF2 565 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 CCDC14Q49A88 953 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 FILIP1LQ4L180 1135 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 ACBD5Q5T8D3 534 aaPredicted RBP11.68□□□□□ -0.54
TUBB3-204ENST00000554116 ATG14Q6ZNE5 492 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 RAB11FIP2Q7L804 512 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 SDR16C5Q8N3Y7 309 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 PCDH19Q8TAB3 1148 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 JOSD2Q8TAC2 188 aa11.68□□□□□ -0.54
TUBB3-204ENST00000554116 SLC30A5Q8TAD4 765 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms