RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ELF4Q99607 663 aaPredicted RBP20.56■□□□□ 0.88
FOXA1-203ENST00000553751 SLC32A1Q9H598 525 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 GDF3Q9NR23 364 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 DTLQ9NZJ0 730 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 PCDHGB2Q9Y5G2 931 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 A0A1B0GTQ1 180 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 DFNA5O60443 496 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 ADRB1P08588 477 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 CLDN2P57739 230 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 ELP6Q0PNE2 266 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 SHBQ15464 509 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 IFI16Q16666 785 aaKnown RBP20.55■□□□□ 0.88
FOXA1-203ENST00000553751 PRAMEF14Q5SWL7 426 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 CFAP58Q5T655 872 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 N4BP2L1Q5TBK1 243 aaPredicted RBP20.55■□□□□ 0.88
FOXA1-203ENST00000553751 DBX2Q6ZNG2 339 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 ABI3BPQ7Z7G0 1075 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 BBS5Q8N3I7 341 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 TPCN2Q8NHX9 752 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 ASB12Q8WXK4 309 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 MAML1Q92585 1016 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 FATE1Q969F0 183 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 RNF25Q96BH1 459 aaPredicted RBP20.55■□□□□ 0.88
FOXA1-203ENST00000553751 CAMK1GQ96NX5 476 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 TSGA13Q96PP4 275 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 KLF6Q99612 283 aaPredicted RBP20.55■□□□□ 0.88
FOXA1-203ENST00000553751 PCDH12Q9NPG4 1184 aa20.55■□□□□ 0.88
FOXA1-203ENST00000553751 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 BTNL10A8MVZ5 291 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 PCDHGA12O60330 932 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 MAGEC1O60732 1142 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 MMP20O60882 483 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 PAK4O96013 591 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 THEGLP0DJG4 465 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 MX2P20592 715 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 XPAP23025 273 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 CCNCP24863 283 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 MMP12P39900 470 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 VAV2P52735 878 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 MAXP61244 160 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 IL9RQ01113 521 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 HNRNPDQ14103 355 aaKnown RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 TMEM52BQ4KMG9 183 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 TIGD7Q6NT04 549 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 MFSD7Q6UXD7 560 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 OR13H1Q8NG92 308 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 CXorf40AQ8TE69 158 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 LRRN4Q8WUT4 740 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 SPOCK2Q92563 424 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 HDAC11Q96DB2 347 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 KLHDC7BQ96G42 594 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 LENG8Q96PV6 779 aaPredicted RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 WRAP53Q9BUR4 548 aaKnown RBP20.54■□□□□ 0.88
FOXA1-203ENST00000553751 LACRTQ9GZZ8 138 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 ERVMER34-1Q9H9K5 563 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 NOD2Q9HC29 1040 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 SCUBE2Q9NQ36 999 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 ATP8A1Q9Y2Q0 1164 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 DUSP10Q9Y6W6 482 aa20.54■□□□□ 0.88
FOXA1-203ENST00000553751 PCNX2A6NKB5 2137 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 RIOK3O14730 519 aaKnown RBP20.53■□□□□ 0.88
FOXA1-203ENST00000553751 APOL1O14791 398 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 MATN3O15232 486 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 FLRT2O43155 660 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 PJA2O43164 708 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 CBFA2T3O75081 653 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 PRKCGP05129 697 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 CDKN2BP42772 138 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 MARCKSL1P49006 195 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 FAM193AP78312 1265 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 SGCGQ13326 291 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 TAZQ16635 292 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 RALGPS1Q5JS13 557 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 ERAP2Q6P179 960 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 KYAT3Q6YP21 454 aaKnown RBP20.53■□□□□ 0.88
FOXA1-203ENST00000553751 DAAM2Q86T65 1068 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 SLC22A18ASQ8N1D0 253 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 DENND6BQ8NEG7 585 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 BMFQ96LC9 184 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 NT5MQ9NPB1 228 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 GPR27Q9NS67 375 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 PCOLCE2Q9UKZ9 415 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 HS3ST3A1Q9Y663 406 aa20.53■□□□□ 0.88
FOXA1-203ENST00000553751 POM121BA6NF01 834 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 A6NNZ2 444 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 HTRA2O43464 458 aaPredicted RBP20.52■□□□□ 0.88
FOXA1-203ENST00000553751 SOCS5O75159 536 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 PPIDQ08752 370 aaKnown RBP20.52■□□□□ 0.88
FOXA1-203ENST00000553751 TRAF2Q12933 501 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 ODF2Q5BJF6 829 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 ALG1LQ6GMV1 187 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 RFX6Q8HWS3 928 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 KATNAL2Q8IYT4 538 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 BAHD1Q8TBE0 780 aaPredicted RBP20.52■□□□□ 0.88
FOXA1-203ENST00000553751 FAM174AQ8TBP5 190 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 ZNF830Q96NB3 372 aaPredicted RBP20.52■□□□□ 0.88
FOXA1-203ENST00000553751 OLFM3Q96PB7 478 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 LGMNQ99538 433 aa20.52■□□□□ 0.88
FOXA1-203ENST00000553751 MAK16Q9BXY0 300 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms