RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 NAV2Q8IVL1 2488 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 I6L893 689 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 RNF103O00237 685 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TCEA3O75764 348 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ZMPSTE24O75844 475 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TMCC1O94876 653 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TGM2P21980 687 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 EEF1GP26641 437 aaKnown RBP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 HTR1BP28222 390 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 BLKP51451 505 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 PPARDQ03181 441 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ELP6Q0PNE2 266 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 FGL2Q14314 439 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ELOCQ15369 112 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ISXQ2M1V0 245 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 MYLK3Q32MK0 819 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 DPCR1Q3MIW9 517 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ZSCAN23Q3MJ62 389 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ERAP2Q6P179 960 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 SCYL2Q6P3W7 929 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 GDPD4Q6W3E5 623 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TRIM72Q6ZMU5 477 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 RD3Q7Z3Z2 195 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 HID1Q8IV36 788 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 ATL2Q8NHH9 583 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 WDR48Q8TAF3 677 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 SLC20A1Q8WUM9 679 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 BMFQ96LC9 184 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 C1QTNF2Q9BXJ5 285 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 STK33Q9BYT3 514 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 DPH1Q9BZG8 443 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 STRADBQ9C0K7 418 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 NUP62CLQ9H1M0 184 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 CLSTN2Q9H4D0 955 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 CAAP1Q9H8G2 361 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 EPB41L5Q9HCM4 733 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 FAM207AQ9NSI2 230 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TMEM248Q9NWD8 314 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TLN1Q9Y490 2541 aaKnown RBP10.04□□□□□ -0.8
ACTN1-208ENST00000553370 TPP1O14773 563 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CREB3O43889 395 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 MMP20O60882 483 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 ZNF821O75541 412 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-208ENST00000553370 LRIG2O94898 1065 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CALB1P05937 261 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 ALPIP09923 528 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 KRT3P12035 628 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 GPD1P21695 349 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 EPHB2P29323 1055 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 ADRA1BP35368 520 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 IGFALSP35858 605 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 POLR2FP61218 127 aaKnown RBP10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CDR2Q01850 454 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 KLHL40Q2TBA0 621 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 MIIPQ5JXC2 388 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 TRNP1Q6NT89 227 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 DNAJC24Q6P3W2 148 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 MACC1Q6ZN28 852 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 ARCQ7LC44 396 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 SLFN11Q7Z7L1 901 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 FSTL5Q8N475 847 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-208ENST00000553370 WDR36Q8NI36 951 aaKnown RBP10.03□□□□□ -0.8
ACTN1-208ENST00000553370 SLC30A5Q8TAD4 765 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 GPT2Q8TD30 523 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CASKIN2Q8WXE0 1202 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 GRAMD1AQ96CP6 724 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 EXOC2Q96KP1 924 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 LENG8Q96PV6 779 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CCDC3Q9BQI4 270 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 LRRC61Q9BV99 259 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 RETREG1Q9H6L5 497 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CATSPERBQ9H7T0 1116 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 NLRC4Q9NPP4 1024 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 ADAM22Q9P0K1 906 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 TMEM59LQ9UK28 342 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 PADI4Q9UM07 663 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 BOD1L1Q8NFC6 3051 aa10.03□□□□□ -0.8
ACTN1-208ENST00000553370 CCDC187A0A096LP49 1063 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 LY6G6EA0A0G2JKS1 128 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 CXorf51AA0A1B0GTR3 108 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 EME2A4GXA9 379 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-208ENST00000553370 LMO7DNF2Z398 122 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 TOR1BO14657 336 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 SPINT1O43278 529 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 KDELR3O43731 214 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 C1QL1O75973 258 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 TNFSF15O95150 251 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 RASGRP1O95267 797 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 GJB6O95452 261 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 PCCBP05166 539 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 GIMD1P0DJR0 217 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 PLA2G2AP14555 144 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 MMP8P22894 467 aa10.02□□□□□ -0.81
ACTN1-208ENST00000553370 SOX5P35711 763 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms