RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 DEF6Q9H4E7 631 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 SYNCQ9H7C4 482 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 FBRSL1Q9HCM7 1045 aaKnown RBP5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 CNGB3Q9NQW8 809 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 DLL4Q9NR61 685 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 RBM12Q9NTZ6 932 aaKnown RBP5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 SEPT11Q9NVA2 429 aaKnown RBP5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 THG1LQ9NWX6 298 aaKnown RBP5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 CLIC5Q9NZA1 410 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 CBLCQ9ULV8 474 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 SH3BP1Q9Y3L3 701 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 CEP83Q9Y592 693 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 DUSP10Q9Y6W6 482 aa5.78□□□□□ -1.48
SMARCC2-213ENST00000552627 MUC6Q6W4X9 2439 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 SYNJ2BP-COX16A0A087WUM0 186 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 KANSL1LA0AUZ9 987 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 GOLGA8SH3BPF8 625 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ACOT7O00154 380 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 PRRG2O14669 202 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TRDMT1O14717 391 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TRIM24O15164 1050 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 STC2O76061 302 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 FBXO21O94952 628 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 CCDC172P0C7W6 258 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 SKILP12757 684 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 AOC1P19801 751 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 CORO1AP31146 461 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 HOXC13P31276 330 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 CNR2P34972 360 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 GJA4P35212 333 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ZNF75DP51815 510 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 STARD6P59095 220 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 BPIFB4P59827 614 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 RNASE9P60153 205 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 NOMO3P69849 1222 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 CDR2Q01850 454 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 KDSRQ06136 332 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 RUNX3Q13761 415 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ASIC2Q16515 512 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 MEA1Q16626 185 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ZSCAN26Q16670 478 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TRIM61Q5EBN2 209 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 LY6G5CQ5SRR4 150 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 CD276Q5ZPR3 534 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 OR6B2Q6IFH4 312 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 FSTL4Q6MZW2 842 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TRMT10BQ6PF06 316 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 RHBDF2Q6PJF5 856 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TMCO3Q6UWJ1 677 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 OLFML1Q6UWY5 402 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 MMS22LQ6ZRQ5 1243 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 Q6ZS52 159 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TPGS1Q6ZTW0 290 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 IRF2BP2Q7Z5L9 587 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 SRLQ86TD4 932 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TMEM110Q86TL2 294 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TAC4Q86UU9 113 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 PTRH1Q86Y79 214 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TMEM25Q86YD3 366 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 DENND1CQ8IV53 801 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 DEFB106AQ8N104 65 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 CPA6Q8N4T0 437 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TMEM35BQ8NCS4 154 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 DQX1Q8TE96 717 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 RNF139Q8WU17 664 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 IRGQQ8WZA9 623 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 FAM3CQ92520 227 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 GOLGA1Q92805 767 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ATP2A3Q93084 1043 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 FAM149B1Q96BN6 582 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 LCORQ96JN0 433 aaPredicted RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 HSFY1Q96LI6 401 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 C16orf45Q96MC5 204 aaPredicted RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 C11orf70Q9BRQ4 267 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 DDX23Q9BUQ8 820 aaKnown RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TTYH3Q9C0H2 523 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 TMEM168Q9H0V1 697 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 LHX5Q9H2C1 402 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ECT2Q9H8V3 914 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 LTB4R2Q9NPC1 389 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ZDHHC4Q9NPG8 344 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ABCC13Q9NSE7 274 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 POLR3BQ9NW08 1133 aaPredicted RBP5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 DONSONQ9NYP3 566 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 COX16Q9P0S2 106 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 ATP23Q9Y6H3 246 aa5.77□□□□□ -1.49
SMARCC2-213ENST00000552627 GOLGA6L7A0A1B0GV03 622 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 E2F8A0AVK6 867 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 ERICH4A6NGS2 130 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 C9orf118A6NHY6 69 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 TMCO5BA8MYB1 307 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 NEDD8-MDP1E9PL57 170 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 MAN2B1O00754 1011 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 CAPN9O14815 690 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 TSPAN3O60637 253 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 DAB1O75553 588 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 RASGRP1O95267 797 aa5.76□□□□□ -1.49
SMARCC2-213ENST00000552627 NFATC1O95644 943 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms