RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TMEM169Q96HH4 297 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 MGME1Q9BQP7 344 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 SPON2Q9BUD6 331 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 TAS2R1Q9NYW7 299 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 SEPT3Q9UH03 358 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 ILVBLA1L0T0 632 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ENO1P06733 434 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 SERPINF2P08697 491 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 CCND1P24385 295 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 RFC2P35250 354 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ARSDP51689 593 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 OXCT1P55809 520 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ACVR1Q04771 509 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 RAB33AQ14088 237 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 RBM20Q5T481 1227 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ADGRF1Q5T601 910 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 CHST9Q7L1S5 443 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 PTAR1Q7Z6K3 402 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 CILP2Q8IUL8 1156 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 LMNTD2Q8IXW0 634 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF781Q8N8C0 355 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 OR6P1Q8NGX9 317 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 CRISPLD2Q9H0B8 497 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 CDH19Q9H159 772 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 TMEM39AQ9NV64 488 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 UBA2Q9UBT2 640 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 TAGLN3Q9UI15 199 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 AGO1Q9UL18 857 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 RPL26L1Q9UNX3 145 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ATP11BQ9Y2G3 1177 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 KCTD3Q9Y597 815 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ACTL7AQ9Y615 435 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 LTBP2Q14767 1821 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 C2orf78A6NCI8 922 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 RHOCP08134 193 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 MYL4P12829 197 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 PPP3CCP48454 512 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 SGSHP51688 502 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 PRAMEP78395 509 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF177Q13360 481 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 VEPH1Q14D04 833 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 SLC14A2Q15849 920 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 WASHC2DQ5SRD0 308 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 TEX9Q8N6V9 391 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 PEX13Q92968 403 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 WBP2Q969T9 261 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 PSKH2Q96QS6 385 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 CINPQ9BW66 212 aaPredicted RBP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 DRC3Q9H069 523 aa14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.11□□□□□ -0.15
RAB3IP-216ENST00000552199 A0A1B0GVM2 712 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 ABHD14A-ACY1A0A1B0GW23 586 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 TCAF2A6NFQ2 919 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 CCL22O00626 93 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 DLX3O60479 287 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 TSPAN3O60637 253 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 NDST3O95803 873 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 S1PR4O95977 384 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 IRF1P10914 325 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 AOC1P19801 751 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 GLDCP23378 1020 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 GRIA4P48058 902 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 ARHGAP8P85298 464 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 TWF1Q12792 350 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 USP4Q13107 963 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 UBAP2LQ14157 1087 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 GALNT3Q14435 633 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 RFTN1Q14699 578 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 FAM117BQ6P1L5 589 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 EPGNQ6UW88 154 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 SETD3Q86TU7 594 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 SPATA6LQ8N4H0 392 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 BRSK1Q8TDC3 778 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 BLOC1S5Q8TDH9 187 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 HEXDCQ8WVB3 486 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 TRIB3Q96RU7 358 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 NDNQ99608 321 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 OLFM1Q99784 485 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 MRPL57Q9BQC6 102 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 ILKAPQ9H0C8 392 aaPredicted RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 MRPL46Q9H2W6 279 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 SPG21Q9NZD8 308 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 XPR1Q9UBH6 696 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 TBC1D30Q9Y2I9 924 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
RAB3IP-216ENST00000552199 B2RBV5 119 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 PRRG1O14668 218 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 CPA2P48052 419 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 KPNA2P52292 529 aaKnown RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 NAGLUP54802 743 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 RCN2Q14257 317 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 VWA5B1Q5TIE3 1220 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 ICE2Q659A1 982 aa14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DNAJB7Q7Z6W7 309 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-216ENST00000552199 DDX53Q86TM3 631 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms