RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TAS2R38P59533 333 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 MAXP61244 160 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 ADCY2Q08462 1091 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 FOXC1Q12948 553 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 UGP2Q16851 508 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 TRIM61Q5EBN2 209 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 SLC23A3Q6PIS1 610 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 BRAT1Q6PJG6 821 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 BBS12Q6ZW61 710 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 NDUFAF2Q8N183 169 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 TRIM58Q8NG06 486 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 LRRN4Q8WUT4 740 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 TFB1MQ8WVM0 346 aaKnown RBP10.73□□□□□ -0.69
PTCH1-225ENST00000551845 ALG3Q92685 438 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 SKA1Q96BD8 255 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 FERMT1Q9BQL6 677 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 MGME1Q9BQP7 344 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 FADS3Q9Y5Q0 445 aa10.73□□□□□ -0.69
PTCH1-225ENST00000551845 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 ATRXP46100 2492 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 A0A1W2PQU0 124 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 APOC4-APOC2K7ER74 178 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 KCNK1O00180 336 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 DDX3YO15523 660 aaKnown RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 MTSS1O43312 755 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 AP1G1O43747 822 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 PIGNO95427 931 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 APOC2P02655 101 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 CFIP05156 583 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 IGHV4-34P06331 123 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 SERPINF2P08697 491 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 CR2P20023 1033 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 NFKBIAP25963 317 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 PTPN7P35236 360 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 NOVA1P51513 510 aaKnown RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 RPS21P63220 83 aaKnown RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 RACK1P63244 317 aaKnown RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 IRX4P78413 519 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 ELP6Q0PNE2 266 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 SGCGQ13326 291 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 ZNF211Q13398 564 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 XRCC4Q13426 336 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 STAT4Q14765 748 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 TEAD4Q15561 434 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 TEX44Q53QW1 395 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 MEI1Q5TIA1 1274 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 PEAR1Q5VY43 1037 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 ERAP2Q6P179 960 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 PARS2Q7L3T8 475 aaKnown RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 ZC3H18Q86VM9 953 aaKnown RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 ZSCAN30Q86W11 494 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 HORMAD1Q86X24 394 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 PGBD5Q8N414 524 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 KDF1Q8NAX2 398 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-225ENST00000551845 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 VOPP1Q96AW1 172 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 OLFM3Q96PB7 478 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 SEMA3CQ99985 751 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 SMOC1Q9H4F8 434 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 NOD2Q9HC29 1040 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 SEPT10Q9P0V9 454 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 DMTF1Q9Y222 760 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 TTLL3Q9Y4R7 772 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 PCDHGC4Q9Y5F7 938 aa10.72□□□□□ -0.69
PTCH1-225ENST00000551845 HACD1B0YJ81 288 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PATE3B3GLJ2 98 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 H7C0C1 242 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 TRAFD1O14545 582 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 AREL1O15033 823 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 LATO43561 262 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SOCS5O75159 536 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PAK4O96013 591 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SYPP08247 313 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PECAM1P16284 738 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SPINK2P20155 84 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 MAT2AP31153 395 aaKnown RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ATP5OP48047 213 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 AFF3P51826 1226 aaKnown RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ATXN3P54252 364 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 IFI35P80217 286 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 CCDC173Q0VFZ6 552 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SETMARQ53H47 684 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SLC45A4Q5BKX6 768 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ARMC12Q5T9G4 340 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 KIAA1161Q6NSJ0 714 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 AADACL2Q6P093 401 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PID1Q7Z2X4 250 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ZCCHC9Q8N567 271 aaKnown RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 C1orf216Q8TAB5 229 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 CXorf40AQ8TE69 158 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 PDCD6IPQ8WUM4 868 aaKnown RBP10.71□□□□□ -0.69
PTCH1-225ENST00000551845 HTR3CQ8WXA8 447 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 HAUS1Q96CS2 278 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 ECHDC3Q96DC8 303 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 SERAC1Q96JX3 654 aa10.71□□□□□ -0.69
PTCH1-225ENST00000551845 VAT1Q99536 393 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms