RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 THAP12O43422 761 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 GRAP2O75791 330 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 UGT2B4P06133 528 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 ZSCAN22P10073 491 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 FGF3P11487 239 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 MAP4P27816 1152 aaKnown RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 ARF5P84085 180 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 GNA12Q03113 381 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 LRRC63Q05C16 580 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 IRF4Q15306 451 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 HIST2H2BCQ6DN03 193 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 GDPD4Q6W3E5 623 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 IRF2BP1Q8IU81 584 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 TEX19Q8NA77 164 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 EHBP1Q8NDI1 1231 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 AGBL5Q8NDL9 886 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 OR2AP1Q8NGE2 309 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 LMO3Q8TAP4 145 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 WDR92Q96MX6 357 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 KLHL32Q96NJ5 620 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 TM6SF2Q9BZW4 377 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 DPEP2Q9H4A9 486 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 GPN2Q9H9Y4 310 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 RMND1Q9NWS8 449 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 HPCAL4Q9UM19 191 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 SCN8AQ9UQD0 1980 aa15.45■□□□□ 0.06
CACNB3-220ENST00000551716 ANKRD17O75179 2603 aaKnown RBP15.45■□□□□ 0.06
CACNB3-220ENST00000551716 RP1L1Q8IWN7 2480 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-220ENST00000551716 ITPR2Q14571 2701 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 NKX2-8O15522 239 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 B4GAT1O43505 415 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 RAD1O60671 282 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 F13A1P00488 732 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 KELP23276 732 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 CSTF2P33240 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
CACNB3-220ENST00000551716 RAB15P59190 212 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 ELP6Q0PNE2 266 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 INPP5AQ14642 412 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 TCEA2Q15560 299 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 CRTC2Q53ET0 693 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-220ENST00000551716 DCAF12Q5T6F0 453 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 ANKRD40Q6AI12 368 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 TMPRSS9Q7Z410 1059 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 KIAA1524Q8TCG1 905 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 SSC4DQ8WTU2 575 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 PGAP3Q96FM1 320 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-220ENST00000551716 DPYSL5Q9BPU6 564 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 ZYG11BQ9C0D3 744 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 RETREG1Q9H6L5 497 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 RDH14Q9HBH5 336 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 PIGVQ9NUD9 493 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 CUEDC1Q9NWM3 386 aaPredicted RBP15.44■□□□□ 0.06
CACNB3-220ENST00000551716 DKK3Q9UBP4 350 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 STAP1Q9ULZ2 295 aa15.44■□□□□ 0.06
CACNB3-220ENST00000551716 ZFC3H1O60293 1989 aaKnown RBP15.44■□□□□ 0.06
CACNB3-220ENST00000551716 IGHV5-10-1A0A0J9YXX1 117 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 FAM237AA0A1B0GTK4 181 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 RHPN2P1A8MT19 583 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 SRGAP2O75044 1071 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 DAB1O75553 588 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 TIMP2P16035 220 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 XPAP23025 273 aaPredicted RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 ALDH4A1P30038 563 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 GNA15P30679 374 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 GKP32189 559 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 PRCPP42785 496 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 SLC6A3Q01959 620 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 WSCD2Q2TBF2 565 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 AMZ1Q400G9 498 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 TMEM52BQ4KMG9 183 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 COBLL1Q53SF7 1204 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 KRBA2Q6ZNG9 492 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 ENOSF1Q7L5Y1 443 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 SLC26A9Q7LBE3 791 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 HEATR4Q86WZ0 1026 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 ZDHHC17Q8IUH5 632 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 SMYD4Q8IYR2 804 aaPredicted RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 EFCAB3Q8N7B9 438 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 GALNT11Q8NCW6 608 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 ZNF397Q8NF99 534 aaPredicted RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 OR6K2Q8NGY2 324 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 HCAR2Q8TDS4 363 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 KREMEN1Q96MU8 473 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 TEFMQ96QE5 360 aaKnown RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 CPXM1Q96SM3 734 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 WRAP53Q9BUR4 548 aaKnown RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 GTPBP4Q9BZE4 634 aaKnown RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 INTS2Q9H0H0 1204 aaKnown RBP15.43■□□□□ 0.06
CACNB3-220ENST00000551716 PRDM8Q9NQV8 689 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 SLC39A1Q9NY26 324 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 B3GALT1Q9Y5Z6 326 aa15.43■□□□□ 0.06
CACNB3-220ENST00000551716 B4E171 279 aa15.42■□□□□ 0.06
CACNB3-220ENST00000551716 CACNB4O00305 520 aaPredicted RBP15.42■□□□□ 0.06
CACNB3-220ENST00000551716 TNFRSF10CO14798 259 aa15.42■□□□□ 0.06
CACNB3-220ENST00000551716 KRT7P08729 469 aa15.42■□□□□ 0.06
CACNB3-220ENST00000551716 MAN1A1P33908 653 aa15.42■□□□□ 0.06
CACNB3-220ENST00000551716 TSPAN7P41732 249 aa15.42■□□□□ 0.06
CACNB3-220ENST00000551716 GPR3P46089 330 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms