RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SYCP2LQ5T4T6 812 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 FBXL19Q6PCT2 694 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 HORMAD1Q86X24 394 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 MAP7D3Q8IWC1 876 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 PELI3Q8N2H9 469 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 KIAA1524Q8TCG1 905 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 HDAC11Q96DB2 347 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 SERAC1Q96JX3 654 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 KLF6Q99612 283 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-208ENST00000550283 WRAP53Q9BUR4 548 aaKnown RBP11.32□□□□□ -0.6
RAB5B-208ENST00000550283 PREBQ9HCU5 417 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 PCDH12Q9NPG4 1184 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 DDX56Q9NY93 547 aaKnown RBP11.32□□□□□ -0.6
RAB5B-208ENST00000550283 SEPT3Q9UH03 358 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 GUCA1BQ9UMX6 200 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 ANKRD36A6QL64 1941 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 POM121BA6NF01 834 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 ARHGAP6O43182 974 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 HTRA2O43464 458 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 PCDH8O95206 1070 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 PAK4O96013 591 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 PRLP01236 227 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 JCHAINP01591 159 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 CCNB1P14635 433 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 CCNCP24863 283 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 HOXD12P35452 270 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 IL9RQ01113 521 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 NSUN2Q08J23 767 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 WASHC5Q12768 1159 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 KIF5AQ12840 1032 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 COL9A2Q14055 689 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 ZNF235Q14590 738 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 RFTN1Q14699 578 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 PRKD1Q15139 912 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 UGP2Q16851 508 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 MARC1Q5VT66 337 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 KCTD16Q68DU8 428 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 RFLNAQ6ZTI6 216 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 VSIG1Q86XK7 387 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 MINDY1Q8N5J2 469 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 TMEM145Q8NBT3 493 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 CCNYQ8ND76 341 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 EXD1Q8NHP7 514 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 LRIG1Q96JA1 1093 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 BMFQ96LC9 184 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 CAMK1GQ96NX5 476 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 NUDCD1Q96RS6 583 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 IL12RB2Q99665 862 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 SEMA3CQ99985 751 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 C1QTNF2Q9BXJ5 285 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 LZTFL1Q9NQ48 299 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 DYRK4Q9NR20 520 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 MBNL1Q9NR56 388 aaKnown RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 RBM22Q9NW64 420 aaKnown RBP eCLIP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 DONSONQ9NYP3 566 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 DKK3Q9UBP4 350 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 PNMA8BQ9ULN7 279 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-208ENST00000550283 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 ATP8A1Q9Y2Q0 1164 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 ZFHX4Q86UP3 3567 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 TMEM131Q92545 1883 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 CACNA1EQ15878 2313 aa11.31□□□□□ -0.6
RAB5B-208ENST00000550283 PKD1L2Q7Z442 2459 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 KNL1Q8NG31 2342 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 UPK3BL1B0FP48 263 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 UPK3BL2E5RIL1 263 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 SLC30A4O14863 429 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 AP1G1O43747 822 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 ZRANB2O95218 330 aaKnown RBP eCLIP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 IPO7O95373 1038 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 CD59P13987 128 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 LHCGRP22888 699 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 CD68P34810 354 aaPredicted RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 MMP12P39900 470 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 CTSKP43235 329 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 RACK1P63244 317 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 FAM193AP78312 1265 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 HNRNPDQ14103 355 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 HLA-BQ31612 363 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 UAP1L1Q3KQV9 507 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 ALG1LQ6GMV1 187 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 BBS12Q6ZW61 710 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 PRPF39Q86UA1 669 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 ZC3H18Q86VM9 953 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 CCDC50Q8IVM0 306 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 CCDC13Q8IYE1 715 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 RCOR2Q8IZ40 523 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 SLC22A18ASQ8N1D0 253 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 GPR161Q8N6U8 529 aaKnown RBP11.3□□□□□ -0.6
RAB5B-208ENST00000550283 OR13H1Q8NG92 308 aa11.3□□□□□ -0.6
RAB5B-208ENST00000550283 CEP76Q8TAP6 659 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms