RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 EIF4A3P38919 411 aaKnown RBP13□□□□□ -0.33
PTCH1-218ENST00000548945 NSFP46459 744 aaKnown RBP13□□□□□ -0.33
PTCH1-218ENST00000548945 PTP4A2Q12974 167 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 GRM3Q14832 879 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 AGERQ15109 404 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 ELOCQ15369 112 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 PARP15Q460N3 678 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 TMEM52BQ4KMG9 183 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 PERM1Q5SV97 790 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 FAXCQ5TGI0 409 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 SLFN11Q7Z7L1 901 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 CCDC185Q8N715 623 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 C3orf20Q8ND61 904 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 SLC30A5Q8TAD4 765 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 LIN37Q96GY3 246 aaPredicted RBP13□□□□□ -0.33
PTCH1-218ENST00000548945 EPAS1Q99814 870 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 CCDC3Q9BQI4 270 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 C11orf70Q9BRQ4 267 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 CLPBQ9H078 707 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 TCEAL2Q9H3H9 227 aaPredicted RBP13□□□□□ -0.33
PTCH1-218ENST00000548945 NOL6Q9H6R4 1146 aaKnown RBP13□□□□□ -0.33
PTCH1-218ENST00000548945 NAV2Q8IVL1 2488 aa13□□□□□ -0.33
PTCH1-218ENST00000548945 TMX2-CTNND1H3BSU7 103 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 K7ENP7 123 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 CALB1P05937 261 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 ITGA2BP08514 1039 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 PTMSP20962 102 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 GPD1P21695 349 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 EPHB2P29323 1055 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 HTR7P34969 479 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 RFC1P35251 1148 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-218ENST00000548945 HK3P52790 923 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 PDX1P52945 283 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 AIF1P55008 147 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 POLR2FP61218 127 aaKnown RBP12.99□□□□□ -0.33
PTCH1-218ENST00000548945 RHOAP61586 193 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 EIF3IQ13347 325 aaKnown RBP12.99□□□□□ -0.33
PTCH1-218ENST00000548945 SERINC3Q13530 473 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 C1orf61Q13536 156 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 SPIDRQ14159 915 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 LRRC14Q15048 493 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 EFHC2Q5JST6 749 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 INO80CQ6PI98 192 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-218ENST00000548945 LEKR1Q6ZMV7 388 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 PHF13Q86YI8 300 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-218ENST00000548945 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 ARL10Q8N8L6 244 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 ATL2Q8NHH9 583 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 TTC9Q92623 222 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 SELENOOQ9BVL4 669 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 MAGEB5Q9BZ81 275 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 CATSPERBQ9H7T0 1116 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 MBNL1Q9NR56 388 aaKnown RBP12.99□□□□□ -0.33
PTCH1-218ENST00000548945 TAB2Q9NYJ8 693 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 DONSONQ9NYP3 566 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 ADAM22Q9P0K1 906 aa12.99□□□□□ -0.33
PTCH1-218ENST00000548945 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 SIGLEC16A6NMB1 481 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 RASA4BC9J798 803 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 FGF10O15520 208 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 RASA4O43374 803 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 RASGRP1O95267 797 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 TPM2P07951 284 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 XPAP23025 273 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 HTR1BP28222 390 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 STAT1P42224 750 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 ZNF143P52747 638 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 NFATC4Q14934 902 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 IRF4Q15306 451 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 LRRC73Q5JTD7 316 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 CDKAL1Q5VV42 579 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 BRAT1Q6PJG6 821 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 CRTC1Q6UUV9 634 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 DNAAF5Q86Y56 855 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 ENOX1Q8TC92 643 aaKnown RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 ZNF641Q96N77 438 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 WRAP53Q9BUR4 548 aaKnown RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 EDEM3Q9BZQ6 932 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 NUP62CLQ9H1M0 184 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 FAM207AQ9NSI2 230 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-218ENST00000548945 LHX3Q9UBR4 397 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 ACSL6Q9UKU0 697 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 DOLKQ9UPQ8 538 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 PCDHGA7Q9Y5G6 932 aa12.98□□□□□ -0.33
PTCH1-218ENST00000548945 ANKRD62A6NC57 917 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 J3QKU1 62 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 TNFSF15O95150 251 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 GJB6O95452 261 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 C6P13671 934 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 CTSEP14091 401 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
PTCH1-218ENST00000548945 KRT31Q15323 416 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 UGP2Q16851 508 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 CLEC16AQ2KHT3 1053 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 ALG11Q2TAA5 492 aa12.97□□□□□ -0.33
PTCH1-218ENST00000548945 WSCD2Q2TBF2 565 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms