RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 UPF3AQ9H1J1 476 aaKnown RBP9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 CLK4Q9HAZ1 481 aaKnown RBP9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 CDHR5Q9HBB8 845 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 IGSF5Q9NSI5 407 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 TREX1Q9NSU2 369 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 ARMC1Q9NVT9 282 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 CCDC167Q9P0B6 97 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 KLK14Q9P0G3 267 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 CROTQ9UKG9 612 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 CNOT6Q9ULM6 557 aaKnown RBP9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 KCNH4Q9UQ05 1017 aa9.96□□□□□ -0.81
SMARCD1-205ENST00000548573 SRCAPQ6ZRS2 3230 aa9.96□□□□□ -0.82
SMARCD1-205ENST00000548573 TRIM64CA6NLI5 447 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 MRASO14807 208 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 GPC4O75487 556 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 SRP72O76094 671 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 LRPAP1P30533 357 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ADCYAP1R1P41586 468 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 IREB2P48200 963 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 C1QTNF8P60827 252 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 POU6F1Q14863 301 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 KCTD21Q4G0X4 260 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 AGAP9Q5VTM2 703 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 KIAA0930Q6ICG6 404 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ZBTB49Q6ZSB9 765 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 LPCAT2Q7L5N7 544 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CUZD1Q86UP6 607 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 DHFR2Q86XF0 187 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CROCCP3Q8IVE0 287 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 MYO1HQ8N1T3 1032 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 SPATA6LQ8N4H0 392 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 SPATA22Q8NHS9 363 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 MIPOL1Q8TD10 442 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ROPN1LQ96C74 230 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 SGF29Q96ES7 293 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 OSMRQ99650 979 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 TKTL2Q9H0I9 626 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CAAP1Q9H8G2 361 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 NOL11Q9H8H0 719 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 GOLGA2P5Q9HBQ8 144 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ENTPD7Q9NQZ7 604 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 VPS45Q9NRW7 570 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 DNAAF2Q9NVR5 837 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 DUS2Q9NX74 493 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 PTBP2Q9UKA9 531 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 TANC1Q9C0D5 1861 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 NEMP2A6NFY4 417 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 A8MT66 165 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF701M0R085 212 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 RBP1P09455 135 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CPB1P15086 417 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ADRA1AP35348 466 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 GEMP55040 296 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 RALGDSQ12967 914 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 LPIN1Q14693 890 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 KIAA0319Q5VV43 1072 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF470Q6ECI4 717 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ERMP1Q7Z2K6 904 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 PTAR1Q7Z6K3 402 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC22A9Q8IVM8 553 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 FIBCD1Q8N539 461 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 MFSD2AQ8NA29 543 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 IPMKQ8NFU5 416 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 OR2T34Q8NGX1 318 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 OR2T3Q8NH03 318 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ADAMTS16Q8TE57 1224 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 TFAP2CQ92754 450 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ZUFSPQ96AP4 578 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 TMIGD2Q96BF3 282 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CELF6Q96J87 481 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 ZNF512Q96ME7 567 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 RANBP9Q96S59 729 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 TCF12Q99081 682 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 IL12RB2Q99665 862 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CIB1Q99828 191 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 TRMOQ9BU70 441 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 PRKD2Q9BZL6 878 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 KATNBL1Q9H079 304 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 FAM49AQ9H0Q0 323 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 GLOD4Q9HC38 313 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CHST12Q9NRB3 414 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 CHCHD3Q9NX63 227 aaKnown RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 FBXO5Q9UKT4 447 aa9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 MTF2Q9Y483 593 aaPredicted RBP9.95□□□□□ -0.82
SMARCD1-205ENST00000548573 SHROOM3Q8TF72 1996 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 BBIP1A8MTZ0 92 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 MT-CYBP00156 380 aaPredicted RBP9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 MMP3P08254 477 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 LTA4HP09960 611 aaKnown RBP9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 USP17L7P0C7H9 530 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 FGFR3P22607 806 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 CYP2C18P33260 490 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 NDST2P52849 883 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 NUP107P57740 925 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 PRKCQQ04759 706 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 CSHL1Q14406 222 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 SLC14A2Q15849 920 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 PPP1R3AQ16821 1122 aa9.94□□□□□ -0.82
SMARCD1-205ENST00000548573 INTS11Q5TA45 600 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms