RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 A0A1W2PQU0 124 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 RNGTTO60942 597 aaKnown RBP16.95■□□□□ 0.3
CCDC38-203ENST00000546803 RBP3P10745 1247 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 CA4P22748 312 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 NFKBIAP25963 317 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 PPP2CBP62714 309 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 RPS21P63220 83 aaKnown RBP16.95■□□□□ 0.3
CCDC38-203ENST00000546803 PPP2CAP67775 309 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 WASHC5Q12768 1159 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 SETMARQ53H47 684 aaPredicted RBP16.95■□□□□ 0.3
CCDC38-203ENST00000546803 ARMC12Q5T9G4 340 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 ERAP2Q6P179 960 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 B4GALNT4Q76KP1 1039 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 ALYREFQ86V81 257 aaKnown RBP16.95■□□□□ 0.3
CCDC38-203ENST00000546803 SLC13A5Q86YT5 568 aaPredicted RBP16.95■□□□□ 0.3
CCDC38-203ENST00000546803 DCLK2Q8N568 766 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 C1orf216Q8TAB5 229 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 AGAP3Q96P47 875 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 MIR1-1HGQ9H1L0 117 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 SLC25A51Q9H1U9 297 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 TRHDEQ9UKU6 1024 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 RAI2Q9Y5P3 530 aa16.95■□□□□ 0.3
CCDC38-203ENST00000546803 NYNRINQ9P2P1 1898 aaKnown RBP16.95■□□□□ 0.3
CCDC38-203ENST00000546803 NUP205Q92621 2012 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 KHNYNO15037 678 aaKnown RBP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 BCAT2O15382 392 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 PGLSO95336 258 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 TGM1P22735 817 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 NIPAL4Q0D2K0 466 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 TRAF2Q12933 501 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 SLC14A2Q15849 920 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 ZNF284Q2VY69 593 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 TMEM52BQ4KMG9 183 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 DARS2Q6PI48 645 aaKnown RBP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 SLC23A3Q6PIS1 610 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 ZSWIM9Q86XI8 627 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 PDCD6IPQ8WUM4 868 aaKnown RBP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 MAIP1Q8WWC4 291 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 ORAI3Q9BRQ5 295 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 CEP41Q9BYV8 373 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 GLOD4Q9HC38 313 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 PCDH12Q9NPG4 1184 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 KLHL8Q9P2G9 620 aaPredicted RBP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 PHTF1Q9UMS5 762 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 PCDHB9Q9Y5E1 797 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 PLXND1Q9Y4D7 1925 aa16.94■□□□□ 0.3
CCDC38-203ENST00000546803 ATXN2Q99700 1313 aaKnown RBP16.94■□□□□ 0.3
CCDC38-203ENST00000546803 TCRBV7S2A1N4TA0A589 114 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 CFAP69A5D8W1 941 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 RIOK3O14730 519 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 SPINT1O43278 529 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 STK10O94804 968 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 CPP00450 1065 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 RBL1P28749 1068 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 MAT2AP31153 395 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 RPL26P61254 145 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 RACK1P63244 317 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 CCDC6Q16204 474 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 TRIM61Q5EBN2 209 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 PID1Q7Z2X4 250 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 NDUFAF2Q8N183 169 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 SLC35F6Q8N357 371 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 ZCCHC9Q8N567 271 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 C12orf50Q8NA57 414 aaPredicted RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 SLC35B2Q8TB61 432 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 CXorf40AQ8TE69 158 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 ASB12Q8WXK4 309 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 IMP4Q96G21 291 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 PARD6AQ9NPB6 346 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 SLC6A14Q9UN76 642 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 RPL26L1Q9UNX3 145 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 ZFR2Q9UPR6 939 aaKnown RBP16.93■□□□□ 0.3
CCDC38-203ENST00000546803 ITM2BQ9Y287 266 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 EML5Q05BV3 1969 aa16.93■□□□□ 0.3
CCDC38-203ENST00000546803 WDFY4Q6ZS81 3184 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 GPR179Q6PRD1 2367 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 ENC1O14682 589 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 FZD6O60353 706 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 CFIP05156 583 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 MMP2P08253 660 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 CD86P42081 329 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 AFF3P51826 1226 aaKnown RBP16.92■□□□□ 0.3
CCDC38-203ENST00000546803 SKOR1P84550 965 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 TEAD4Q15561 434 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 LRRC73Q5JTD7 316 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 SEL1L3Q68CR1 1132 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 NAPEPLDQ6IQ20 393 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 PRR23CQ6ZRP0 262 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 ZNF567Q8N184 647 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 TADA1Q96BN2 335 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 SERAC1Q96JX3 654 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 PBKQ96KB5 322 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 FAM118BQ9BPY3 351 aa16.92■□□□□ 0.3
CCDC38-203ENST00000546803 C1QTNF2Q9BXJ5 285 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms