RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TMC5Q6UXY8 1006 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 GRASPQ7Z6J2 395 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TMEM25Q86YD3 366 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 E2F7Q96AV8 911 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 NXNL1Q96CM4 212 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 POLR1EQ9GZS1 481 aaKnown RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 PNPOQ9NVS9 261 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 UBA2Q9UBT2 640 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 RUVBL2Q9Y230 463 aaKnown RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 SDK1Q7Z5N4 2213 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TANC1Q9C0D5 1861 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 UBA6A0AVT1 1052 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 MYL2P10916 166 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TAS2R39P59534 338 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 PRAMEP78395 509 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 DLG1Q12959 904 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 CAMK1Q14012 370 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 CSHL1Q14406 222 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 TAF1BQ53T94 588 aaPredicted RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 NEPROQ6NW34 567 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 ZC3HC1Q86WB0 502 aaKnown RBP12.06□□□□□ -0.48
CCDC38-202ENST00000546386 MFN1Q8IWA4 741 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 ARMC5Q96C12 935 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 OLFM1Q99784 485 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 HEY2Q9UBP5 337 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 FAM50BQ9Y247 325 aa12.06□□□□□ -0.48
CCDC38-202ENST00000546386 MIA3Q5JRA6 1907 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 IQCF5A8MTL0 148 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 KIAA0355O15063 1070 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 TMCC1O94876 653 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 CHRNGP07510 517 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 ATXN1LP0C7T5 689 aaKnown RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 NPY2RP49146 381 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 RING1Q06587 406 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 CDK18Q07002 472 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 MESP2Q0VG99 397 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 PEX6Q13608 980 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 CYTH1Q15438 398 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 GPR158Q5T848 1215 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 LINC00523Q86TU6 105 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 TDRD5Q8NAT2 981 aaKnown RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 MDGA1Q8NFP4 955 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 CPNE1Q99829 537 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 FEM1AQ9BSK4 669 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 KIFC1Q9BW19 673 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 PHACTR1Q9C0D0 580 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 IGFLR1Q9H665 355 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 PPARGC1AQ9UBK2 798 aaKnown RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 EVLQ9UI08 416 aaPredicted RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 ZNF180Q9UJW8 692 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 ANAPC1Q9H1A4 1944 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 NEDD8-MDP1E9PL57 170 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 TM9SF1O15321 606 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 OR1I1O60431 355 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 LILRB3O75022 631 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 CTSAP10619 480 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 LIMK2P53671 638 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 AQP5P55064 265 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 HSF5Q4G112 596 aaPredicted RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 RABGAP1LQ5R372 815 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 HERC6Q8IVU3 1022 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 TCEAL8Q8IYN2 117 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 OR4K2Q8NGD2 314 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 ANKRD49Q8WVL7 239 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 MRPS31Q92665 395 aaKnown RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 PHF21BQ96EK2 531 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 TMEM120AQ9BXJ8 343 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 MCOLN1Q9GZU1 580 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 ABCB8Q9NUT2 735 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 FBXO5Q9UKT4 447 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 HBS1LQ9Y450 684 aaKnown RBP12.05□□□□□ -0.48
CCDC38-202ENST00000546386 INSL6Q9Y581 213 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 RAD54BQ9Y620 910 aa12.05□□□□□ -0.48
CCDC38-202ENST00000546386 GOLGA8QA0A0J9YX86 632 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 FAM95CA0A1B0GW59 222 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 GOLGA8OA6NCC3 632 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 GOLGA8NF8WBI6 632 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SERPINF2P08697 491 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 SPRP35270 261 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 ALDH18A1P54886 795 aaKnown RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 ZBTB16Q05516 673 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 IL10RBQ08334 325 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PCLAFQ15004 111 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 PARP15Q460N3 678 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 TPGS2Q68CL5 300 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 NAIF1Q69YI7 327 aaPredicted RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 EP400NLQ6ZTU2 488 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 NLRP9Q7RTR0 991 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 ADGRD2Q7Z7M1 963 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CACUL1Q86Y37 369 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 CCNYL1Q8N7R7 359 aa12.04□□□□□ -0.48
CCDC38-202ENST00000546386 C2orf15Q8WU43 125 aaKnown RBP12.04□□□□□ -0.48
CCDC38-202ENST00000546386 MYRFLQ96LU7 910 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms