RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 FEM1CQ96JP0 617 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 CMTM3Q96MX0 182 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 ZMAT2Q96NC0 199 aaKnown RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 STRA6Q9BX79 667 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TRIM2Q9C040 744 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 PDE7BQ9NP56 450 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 MLXIPLQ9NP71 852 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 CDH22Q9UJ99 828 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TLK1Q9UKI8 766 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 ICKQ9UPZ9 632 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 FRMD4BQ9Y2L6 1034 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 CLDN16Q9Y5I7 305 aa4.32□□□□□ -1.72
SNHG1-222ENST00000545308 MAGED1Q9Y5V3 778 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-222ENST00000545308 TRPM2O94759 1503 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ATRNO75882 1429 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ERBINQ96RT1 1412 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 RIMS2Q9UQ26 1411 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 NPHP3Q7Z494 1330 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 MYO5BQ9ULV0 1848 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 A0A0A0MQY5 61 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 CCDC151A5D8V7 595 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 BTBD18B2RXH4 712 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 KCNJ18B7U540 433 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 STRNO43815 780 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 CBX6O95503 412 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 SERPINC1P01008 464 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ZNF8P17098 575 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 CDH2P19022 906 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 GCH1P30793 250 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 NNMTP40261 264 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 EIF2DP41214 584 aaKnown RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 SOX2P48431 317 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 TERF1P54274 439 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ZBED6P86452 979 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 GSTA3Q16772 222 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ANXA2RQ3ZCQ2 193 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 GLE1Q53GS7 698 aaKnown RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ZNF362Q5T0B9 420 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 TRIM72Q6ZMU5 477 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 CHST9Q7L1S5 443 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 PRSS45Q7RTY3 260 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 DEFB132Q7Z7B7 95 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 FAM160B2Q86V87 743 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 RASAL3Q86YV0 1011 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ADGRF2Q8IZF7 708 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 PAQR4Q8N4S7 273 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-222ENST00000545308 DNAAF1Q8NEP3 725 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 OR52N4Q8NGI2 321 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 P2RY11Q96G91 374 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 PDLIM2Q96JY6 352 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 MAP7D2Q96T17 732 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 NUAK2Q9H093 628 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 SMARCAD1Q9H4L7 1026 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 CXorf56Q9H5V9 222 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 KAT14Q9H8E8 782 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 SH3GLB2Q9NR46 395 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 RRP7BPQ9NSQ0 103 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 ATP8A2Q9NTI2 1148 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 TFCP2L1Q9NZI6 479 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 NCKIPSDQ9NZQ3 722 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 LRIT1Q9P2V4 623 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 UNC13BO14795 1591 aa4.31□□□□□ -1.72
SNHG1-222ENST00000545308 BRWD3Q6RI45 1802 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 EMSYQ7Z589 1322 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ADGRF5Q8IZF2 1346 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TSPY2A6NKD2 308 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 SH2B2O14492 632 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ADAM20O43506 726 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 HNRNPCL1O60812 293 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ENTPD3O75355 529 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 DDAH2O95865 285 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 IGLV2-14P01704 120 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 HEXAP06865 529 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TSPY3P0CV98 308 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TSPY8P0CW00 308 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 MCM3P25205 808 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 BLKP51451 505 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 HOXA4Q00056 320 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TSPY1Q01534 308 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 NHLH1Q02575 133 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 CDC16Q13042 620 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 FRG1Q14331 258 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 RASA2Q15283 850 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ME3Q16798 604 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ALG11Q2TAA5 492 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 RAB41Q5JT25 222 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 PLEKHS1Q5SXH7 462 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TMEM63BQ5T3F8 832 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 SERTAD4-AS1Q5TG53 156 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ATG9BQ674R7 924 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 TXNDC8Q6A555 127 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 VSTM1Q6UX27 236 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 IL20RBQ6UXL0 311 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 SLC29A4Q7RTT9 530 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ZNF804AQ7Z570 1209 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
SNHG1-222ENST00000545308 KLBQ86Z14 1044 aa4.3□□□□□ -1.72
SNHG1-222ENST00000545308 ARHGAP12Q8IWW6 846 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms