RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LEFTY1O75610 366 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 POP4O95707 220 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CD160O95971 181 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 GSRP00390 522 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CTSLP07711 333 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 ERCC2P18074 760 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 DRD3P35462 400 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 NUDT1P36639 197 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 AFF3P51826 1226 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CCNHP51946 323 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 ADPRHP54922 357 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 PCBP4P57723 403 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CNTN1Q12860 1018 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 SERINC3Q13530 473 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CA9Q16790 459 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 UAP1L1Q3KQV9 507 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 INO80DQ53TQ3 878 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF787Q6DD87 383 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 DPY19L3Q6ZPD9 716 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 ADAT2Q7Z6V5 191 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 PRPF39Q86UA1 669 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 RYBPQ8N488 228 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 LZTR1Q8N653 840 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CHST14Q8NCH0 376 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 OR2AP1Q8NGE2 309 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 TEKT4Q8WW24 435 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 HSPH1Q92598 858 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 ARHGEF26Q96DR7 871 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 BTBD6Q96KE9 485 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 PEBP4Q96S96 227 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 CHP1Q99653 195 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 IGSF5Q9NSI5 407 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 DNAJB12Q9NXW2 375 aaKnown RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 HECAQ9UBI9 543 aaPredicted RBP7.49□□□□□ -1.21
CPSF7-224ENST00000544990 SERGEFQ9UGK8 458 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 NENFQ9UMX5 172 aa7.49□□□□□ -1.21
CPSF7-224ENST00000544990 TM4SF5O14894 197 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 PLXNA2O75051 1894 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ZNF821O75541 412 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SMNDC1O75940 238 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 CER1O95813 267 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 IGSF6O95976 241 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 IGHV4-34P06331 123 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 TMEM253P0C7T8 217 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ARAFP10398 606 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ALAS2P22557 587 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 IL1R2P27930 398 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SERPINB6P35237 376 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 GRIA4P48058 902 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 NEK3P51956 506 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 C21orf59P57076 290 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 RHOAP61586 193 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 RACK1P63244 317 aaKnown RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 GRIK2Q13002 908 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 TBX2Q13207 712 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SLC14A1Q13336 389 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 KRT81Q14533 505 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 GRM3Q14832 879 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 DPYSL2Q16555 572 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SMTNL2Q2TAL5 461 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 MYLK3Q32MK0 819 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 POM121L1PQ3SYA9 428 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SLC45A4Q5BKX6 768 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 KCNT1Q5JUK3 1230 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 AGBL4Q5VU57 503 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 NEK5Q6P3R8 708 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 FBXL19Q6PCT2 694 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 CYP4V2Q6ZWL3 525 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ERN2Q76MJ5 926 aaKnown RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 MAP7D3Q8IWC1 876 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 RHOT2Q8IXI1 618 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 MINDY1Q8N5J2 469 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 GRIN3AQ8TCU5 1115 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 FAM131CQ96AQ9 280 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 HMCESQ96FZ2 354 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 GDAP1L1Q96MZ0 367 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 OSBPL1AQ9BXW6 950 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 HDAC8Q9BY41 377 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 TM6SF2Q9BZW4 377 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SLC39A8Q9C0K1 460 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SLC32A1Q9H598 525 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 NOL6Q9H6R4 1146 aaKnown RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ZDHHC6Q9H6R6 413 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 LRRC19Q9H756 370 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 SP110Q9HB58 689 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 PREBQ9HCU5 417 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 TM9SF3Q9HD45 589 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 FSCN3Q9NQT6 498 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 LATS2Q9NRM7 1088 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 CWC15Q9P013 229 aaKnown RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 UBA2Q9UBT2 640 aaPredicted RBP7.48□□□□□ -1.21
CPSF7-224ENST00000544990 DMTF1Q9Y222 760 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 ACTL7AQ9Y615 435 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 PCDH15Q96QU1 1955 aa7.48□□□□□ -1.21
CPSF7-224ENST00000544990 CACNA1EQ15878 2313 aa7.47□□□□□ -1.21
CPSF7-224ENST00000544990 CEP250Q9BV73 2442 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms