RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ASLP04424 464 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 GDI1P31150 447 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 DLG2Q15700 870 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 ACCSLQ4AC99 568 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 LRRC6Q86X45 466 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 CTAGE3PQ8IX95 158 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 CERS2Q96G23 380 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 ZNF778Q96MU6 729 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 CIPCQ9C0C6 399 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 C5orf42Q9H799 3197 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 ATP5BP06576 529 aaKnown RBP30.68■■■□□ 2.5
CCM2-219ENST00000544363 VASPP50552 380 aaPredicted RBP30.68■■■□□ 2.5
CCM2-219ENST00000544363 SEPT6Q14141 434 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 PPM1NQ8N819 430 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 OR6K2Q8NGY2 324 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 CYB5D2Q8WUJ1 264 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 DCAKDQ8WVC6 231 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 MRGPRX3Q96LB0 322 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 ADGRE3Q9BY15 652 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 PPANQ9NQ55 473 aaKnown RBP30.68■■■□□ 2.5
CCM2-219ENST00000544363 GTSE1Q9NYZ3 720 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 MYLKQ15746 1914 aa30.68■■■□□ 2.5
CCM2-219ENST00000544363 ANKRD36A6QL64 1941 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 PDHA1P08559 390 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 ATP5DP30049 168 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 MAGOHP61326 146 aaKnown RBP30.67■■■□□ 2.5
CCM2-219ENST00000544363 CYP4X1Q8N118 509 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 SORCS1Q8WY21 1168 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 MYLIPQ8WY64 445 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 RMDN1Q96DB5 314 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 IKBKGQ9Y6K9 419 aa30.67■■■□□ 2.5
CCM2-219ENST00000544363 POLR3GO15318 223 aaPredicted RBP30.66■■■□□ 2.5
CCM2-219ENST00000544363 SRPRAP08240 638 aaKnown RBP30.66■■■□□ 2.5
CCM2-219ENST00000544363 DLDP09622 509 aaKnown RBP30.66■■■□□ 2.5
CCM2-219ENST00000544363 GJA4P35212 333 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 NNMTP40261 264 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 MGAT5Q09328 741 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 TMED2Q15363 201 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 RYBPQ8N488 228 aaPredicted RBP30.66■■■□□ 2.5
CCM2-219ENST00000544363 CDKL2Q92772 493 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 ELOVL2Q9NXB9 296 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 NUMBLQ9Y6R0 609 aa30.66■■■□□ 2.5
CCM2-219ENST00000544363 CCDC78A2IDD5 438 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 FZD6O60353 706 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 INHBAP08476 426 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 BCL2L1Q07817 233 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 MESP2Q0VG99 397 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 HTR4Q13639 388 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 MYLK3Q32MK0 819 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 CARD16Q5EG05 197 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 SLC26A11Q86WA9 606 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 PLPP6Q8IY26 295 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 LPCAT1Q8NF37 534 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 TTC8Q8TAM2 541 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 PDCD6IPQ8WUM4 868 aaKnown RBP30.65■■■□□ 2.5
CCM2-219ENST00000544363 TREX1Q9NSU2 369 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 COL4A3Q01955 1670 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 GRXCR2A6NFK2 248 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 ANHXE9PGG2 379 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 OPRD1P41143 372 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 LAMB3Q13751 1172 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 ESRP1Q6NXG1 681 aaKnown RBP30.65■■■□□ 2.5
CCM2-219ENST00000544363 NLRP9Q7RTR0 991 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 CAMK1DQ8IU85 385 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 BRSK1Q8TDC3 778 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 BLOC1S5Q8TDH9 187 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 ATP13A3Q9H7F0 1226 aa30.65■■■□□ 2.5
CCM2-219ENST00000544363 BRWD1Q9NSI6 2320 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 MROH6A6NGR9 719 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 ANKRD66B4E2M5 251 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 SOCS5O75159 536 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 PAPSS2O95340 614 aaPredicted RBP30.64■■■□□ 2.5
CCM2-219ENST00000544363 ERVK-10P10266 1014 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 SP100P23497 879 aaPredicted RBP30.64■■■□□ 2.5
CCM2-219ENST00000544363 KDSRQ06136 332 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 NAB1Q13506 487 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 PTPRNQ16849 979 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 ITPRIPL2Q3MIP1 535 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 TSTD2Q5T7W7 516 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 ARMC12Q5T9G4 340 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 MARK2Q7KZI7 788 aaKnown RBP30.64■■■□□ 2.5
CCM2-219ENST00000544363 PHTF2Q8N3S3 785 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 MYO19Q96H55 970 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 IL1RAPL1Q9NZN1 696 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 ZNF180Q9UJW8 692 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 SLC8A2Q9UPR5 921 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 PCDHB9Q9Y5E1 797 aa30.64■■■□□ 2.5
CCM2-219ENST00000544363 PRRT4C9JH25 899 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 ARNTLO00327 626 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 TRAFD1O14545 582 aaPredicted RBP30.63■■■□□ 2.49
CCM2-219ENST00000544363 HTRA2O43464 458 aaPredicted RBP30.63■■■□□ 2.49
CCM2-219ENST00000544363 TIMM44O43615 452 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 PGLSO95336 258 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 PIGNO95427 931 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 GKP32189 559 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 Q6ZVU0 165 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 KCNMB4Q86W47 210 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 RASSF3Q86WH2 238 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 FAM76AQ8TAV0 307 aa30.63■■■□□ 2.49
CCM2-219ENST00000544363 FRS2Q8WU20 508 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms