RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 DHX40Q8IX18 779 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 KIAA2013Q8IYS2 634 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 CADM3Q8N126 398 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 IGFBPL1Q8WX77 278 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PSPC1Q8WXF1 523 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 ARHGEF2Q92974 986 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 GTF3C6Q969F1 213 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 SMARCE1Q969G3 411 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 CMTM3Q96MX0 182 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TEFMQ96QE5 360 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PIMREGQ9BSJ6 248 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 FBRSL1Q9HCM7 1045 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 SEMA4GQ9NTN9 838 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 NCKIPSDQ9NZQ3 722 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 CDH22Q9UJ99 828 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 RPS6KA6Q9UK32 745 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 UTS2RQ9UKP6 389 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 A4GNTQ9UNA3 340 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TTLL3Q9Y4R7 772 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 E9PCH4 1651 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 MED1Q15648 1581 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 SLIT1O75093 1534 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 NLRP1Q9C000 1473 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 DAPK1P53355 1430 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 FGD6Q6ZV73 1430 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 A0A1W2PQ09 198 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 MYO1GB0I1T2 1018 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 EIF3CLB5ME19 914 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 FAM157AC9JC47 383 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PLOD3O60568 738 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 UGDHO60701 494 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 RAMP2O60895 175 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 RNF8O76064 485 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 OR2C1O95371 312 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PGM3O95394 542 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 HEXAP06865 529 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 C6P13671 934 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 GCH1P30793 250 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 DPP6P42658 865 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PSMC6P62333 389 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TUBA4AP68366 448 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 SLC18A2Q05940 514 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 GRIK3Q13003 919 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 BECN1Q14457 450 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 IRF3Q14653 427 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 PPP2R5BQ15173 497 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 RNPS1Q15287 305 aaKnown RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TXNDC8Q6A555 127 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 SUMO4Q6EEV6 95 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 TSSK4Q6SA08 328 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF782Q6ZMW2 699 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 LURAP1LQ8IV03 231 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.91□□□□□ -1.782e-7■■■■□ 19.6
SCFD1-207ENST00000544052 RPAP2Q8IXW5 612 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 OR4N2Q8NGD1 307 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 HDAC7Q8WUI4 952 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 ZKSCAN4Q969J2 545 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 MMABQ96EY8 250 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-207ENST00000544052 AAMDCQ9H7C9 122 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 NKIRAS2Q9NYR9 191 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 LAMP3Q9UQV4 416 aa3.91□□□□□ -1.78
SCFD1-207ENST00000544052 UNC13BO14795 1591 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 CPS1P31327 1500 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 EFCAB6Q5THR3 1501 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 LMTK2Q8IWU2 1503 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 LRRC7Q96NW7 1537 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 FRMD3A2A2Y4 597 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 C2CD4BA6NLJ0 364 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 CLTBP09497 229 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF8P17098 575 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-207ENST00000544052 TFEBP19484 476 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 CIITAP33076 1130 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 IFI35P80217 286 aaPredicted RBP3.9□□□□□ -1.78
SCFD1-207ENST00000544052 PMPCAQ10713 525 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 CHAF1BQ13112 559 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 COL28A1Q2UY09 1125 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 EARS2Q5JPH6 523 aaKnown RBP3.9□□□□□ -1.78
SCFD1-207ENST00000544052 FCRLBQ6BAA4 426 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF280DQ6N043 979 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 LRRC8EQ6NSJ5 796 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 ZNF813Q6ZN06 617 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 CLEC17AQ6ZS10 378 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 ARHGAP12Q8IWW6 846 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 C8orf58Q8NAV2 365 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 CALML4Q96GE6 196 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 H2AFJQ9BTM1 129 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 KAT14Q9H8E8 782 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 WDR6Q9NNW5 1121 aaKnown RBP3.9□□□□□ -1.78
SCFD1-207ENST00000544052 PDGFCQ9NRA1 345 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 SLC6A13Q9NSD5 602 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 KLHL13Q9P2N7 655 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 FBXO40Q9UH90 709 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 TET3O43151 1660 aa3.9□□□□□ -1.78
SCFD1-207ENST00000544052 NPHP4O75161 1426 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 CHD2O14647 1828 aaKnown RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 COL11A2P13942 1736 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-207ENST00000544052 TRBV5-7A0A0A0MS05 114 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 LRRC53A6NM62 1247 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 NPIPB11E5RHQ5 1161 aa3.9□□□□□ -1.79
SCFD1-207ENST00000544052 RHODO00212 210 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms