RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 BRSK1Q8TDC3 778 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 PEX13Q92968 403 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 VPS39Q96JC1 886 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 FAM167BQ9BTA0 163 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 IQCGQ9H095 443 aaKnown RBP19.98■□□□□ 0.79
COPS7A-218ENST00000543939 NSRP1Q9H0G5 558 aaKnown RBP19.98■□□□□ 0.79
COPS7A-218ENST00000543939 RHOJQ9H4E5 214 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 PIDD1Q9HB75 910 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 RAI2Q9Y5P3 530 aa19.98■□□□□ 0.79
COPS7A-218ENST00000543939 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.97■□□□□ 0.79
COPS7A-218ENST00000543939 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.97■□□□□ 0.79
COPS7A-218ENST00000543939 K7ERQ8 282 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 PRKCGP05129 697 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 GABRB3P28472 473 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 NRIP1P48552 1158 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 SERPINB8P50452 374 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 ACVR1Q04771 509 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 THOC5Q13769 683 aaKnown RBP19.97■□□□□ 0.79
COPS7A-218ENST00000543939 CBX2Q14781 532 aaPredicted RBP19.97■□□□□ 0.79
COPS7A-218ENST00000543939 UGP2Q16851 508 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 NEPROQ6NW34 567 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 PIGWQ7Z7B1 504 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 DENND6AQ8IWF6 608 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 C2CD4AQ8NCU7 369 aaPredicted RBP19.97■□□□□ 0.79
COPS7A-218ENST00000543939 BLOC1S5Q8TDH9 187 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 PTPRN2Q92932 1015 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 IRF7Q92985 503 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 ATXN7L3BQ96GX2 97 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 LINC00597Q9H2U6 94 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 ABCB8Q9NUT2 735 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 FGFR1OP2Q9NVK5 253 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.97■□□□□ 0.79
COPS7A-218ENST00000543939 RIMKLBQ9ULI2 386 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 KCTD3Q9Y597 815 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 PCDHGC4Q9Y5F7 938 aa19.97■□□□□ 0.79
COPS7A-218ENST00000543939 CXorf51AA0A1B0GTR3 108 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 AHSGP02765 367 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 TYK2P29597 1187 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 ABCG1P45844 678 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 TRAF2Q12933 501 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 KCNC3Q14003 757 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SRLQ86TD4 932 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 GDPD5Q8WTR4 605 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 GPR22Q99680 433 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SNX15Q9NRS6 342 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SLC7A4O43246 635 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SMAD6O43541 496 aaKnown RBP19.96■□□□□ 0.79
COPS7A-218ENST00000543939 PDHA1P08559 390 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 HLA-FP30511 346 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 HADHAP40939 763 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SLC1A2P43004 574 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 ARSDP51689 593 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 MPP1Q00013 466 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SLC20A2Q08357 652 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 CTBP1Q13363 440 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 PITRM1Q5JRX3 1037 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 ATXN7L2Q5T6C5 722 aaPredicted RBP19.96■□□□□ 0.79
COPS7A-218ENST00000543939 GKAP1Q5VSY0 366 aaPredicted RBP19.96■□□□□ 0.79
COPS7A-218ENST00000543939 PPP2R2DQ66LE6 453 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 TMC5Q6UXY8 1006 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 VN1R2Q8NFZ6 395 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 CALML6Q8TD86 181 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 LRRC8CQ8TDW0 803 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SPOCK2Q92563 424 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 ZNF75CPQ92670 426 aaPredicted RBP19.96■□□□□ 0.79
COPS7A-218ENST00000543939 OTUB2Q96DC9 234 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SEC16BQ96JE7 1060 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 BBS2Q9BXC9 721 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 SPHK2Q9NRA0 654 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 MSRAQ9UJ68 235 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 ARL5AQ9Y689 179 aa19.96■□□□□ 0.79
COPS7A-218ENST00000543939 EPOPA6NHQ4 379 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 EBAG9O00559 213 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 GLRA3O75311 464 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 PIRTP0C851 137 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 WEE1P30291 646 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 SERPINB4P48594 390 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 AP1S1P61966 158 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 GRM3Q14832 879 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 GLIPR1L2Q4G1C9 344 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 PPM1JQ5JR12 505 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 ZNF470Q6ECI4 717 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 ASTLQ6HA08 431 aaPredicted RBP19.95■□□□□ 0.78
COPS7A-218ENST00000543939 KIAA0408Q6ZU52 694 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 MICALCLQ6ZW33 695 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 CMC1Q7Z7K0 106 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 METTL3Q86U44 580 aaKnown RBP19.95■□□□□ 0.78
COPS7A-218ENST00000543939 ACVR1CQ8NER5 493 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 HDAC10Q969S8 669 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 RMDN1Q96DB5 314 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 MFSD1Q9H3U5 465 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 SFXN1Q9H9B4 322 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 DCDC2Q9UHG0 476 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 FBXO5Q9UKT4 447 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 SPO11Q9Y5K1 396 aa19.95■□□□□ 0.78
COPS7A-218ENST00000543939 WDR91A4D1P6 747 aa19.94■□□□□ 0.78
COPS7A-218ENST00000543939 NEDD8-MDP1E9PL57 170 aa19.94■□□□□ 0.78
COPS7A-218ENST00000543939 TOP3BO95985 862 aaKnown RBP19.94■□□□□ 0.78
COPS7A-218ENST00000543939 CSNK1DP48730 415 aa19.94■□□□□ 0.78
COPS7A-218ENST00000543939 CSRP3P50461 194 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms