RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 HARS2P49590 506 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF143P52747 638 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 NR1H2P55055 460 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 GSCP56915 257 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 GSDMDP57764 484 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 PTP4A2Q12974 167 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 MTF1Q14872 753 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF77Q15935 545 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SLC18A3Q16572 532 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 PRSS53Q2L4Q9 553 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 MFSD4BQ5TF39 518 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SYPL2Q5VXT5 272 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 IZUMO3Q5VZ72 239 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 MSANTD2Q6P1R3 559 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ALKBH5Q6P6C2 394 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DCUN1D2Q6PH85 259 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DARS2Q6PI48 645 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 NPNTQ6UXI9 565 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 UNC5DQ6UXZ4 953 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 PRR23CQ6ZRP0 262 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 HID1Q8IV36 788 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 UBALD2Q8IYN6 164 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CACNA2D3Q8IZS8 1091 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 C3orf20Q8ND61 904 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SIMC1Q8NDZ2 872 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 OLIG1Q8TAK6 271 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DQX1Q8TE96 717 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CENPTQ96BT3 561 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF653Q96CK0 615 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SLC6A18Q96N87 628 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SERPINB11Q96P15 392 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SLC2A13Q96QE2 648 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CHP1Q99653 195 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DCLK3Q9C098 648 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ISCUQ9H1K1 167 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SMOC2Q9H3U7 446 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CD320Q9NPF0 282 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CCM2LQ9NUG4 571 aaPredicted RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 PARVAQ9NVD7 372 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 DUS2Q9NX74 493 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 COX16Q9P0S2 106 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 TBC1D14Q9P2M4 693 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 MYO1AQ9UBC5 1043 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 STOML1Q9UBI4 398 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 AASSQ9UDR5 926 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 CNOT8Q9UFF9 292 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 TBK1Q9UHD2 729 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 MUTYHQ9UIF7 546 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ADAM30Q9UKF2 790 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 ZNF510Q9Y2H8 683 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM98Q9Y2Y6 226 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 HBS1LQ9Y450 684 aaKnown RBP5.25□□□□□ -1.57
CLIP1-217ENST00000543205 REV3LO60673 3130 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 GREB1Q4ZG55 1949 aa5.25□□□□□ -1.57
CLIP1-217ENST00000543205 SIGLEC16A6NMB1 481 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MASP2O00187 686 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MSI1O43347 362 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 NARSO43776 548 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 STC2O76061 302 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 UBXN7O94888 489 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 TRUB2O95900 331 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SLC2A3P11169 496 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ALADP13716 330 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 PDGFRAP16234 1089 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 C5AR1P21730 350 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SDC4P31431 198 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 CYLC1P35663 651 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SULT1E1P49888 294 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ATXN1P54253 815 aaKnown RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SESN3P58005 492 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 GPC5P78333 572 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ZXDBP98169 803 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 PLIN5Q00G26 463 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 FCHO2Q0JRZ9 810 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 NME3Q13232 169 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MAMLD1Q13495 774 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 PDGFRLQ15198 375 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 SPA17Q15506 151 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ASTE1Q2TB18 679 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 RNF220Q5VTB9 566 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 JMJD6Q6NYC1 403 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 HTR3DQ70Z44 454 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ARCQ7LC44 396 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 TAC4Q86UU9 113 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 DNAAF5Q86Y56 855 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 UNC45BQ8IWX7 931 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 CCDC170Q8IYT3 715 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 NAT8LQ8N9F0 302 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 CSGALNACT1Q8TDX6 532 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 OSCP1Q8WVF1 389 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ATP2A3Q93084 1043 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 VMP1Q96GC9 406 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 ZFYVE19Q96K21 471 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MRGPRX3Q96LB0 322 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 LRRC3BQ96PB8 259 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MCEEQ96PE7 176 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 BAG1Q99933 345 aaPredicted RBP5.24□□□□□ -1.57
CLIP1-217ENST00000543205 FAM83CQ9BQN1 747 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 MAGEH1Q9H213 219 aa5.24□□□□□ -1.57
CLIP1-217ENST00000543205 C7orf69Q9H7B7 122 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms